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Group: baker-group - with tag biological_systems [149 articles]

Nye artikler sendt inn av medlemmer i baker-group -gruppen with tag biological_systems
  • Role of Lysine-256 in Citrobacter freundii Tyrosine Phenol-lyase in Monovalent Cation Activation
    Biochemistry, Vol. 43, No. 45. (2004), pp. 14412-9.
    by RS Phillips, HY Chen, D Shim, S Lima, K Tavakoli, B Sundararaju
    posted to metalloregulation biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:14:06 as read
  • Synaptic computation
    Nature, Vol. 431, No. 7010. (2004), pp. 796-803.
    by LF Abbott, WG Regehr
    posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:41 as read
  • The challenges of modeling mammalian biocomplexity
    Nature Biotechnology, Vol. 22, No. 10. (2004), pp. 1268-74.
    by JK Nicholson, E Holmes, JC Lindon, ID Wilson
    posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:41 as read
  • Two-dimensional annotation of genomes
    Nature Biotechnology, Vol. 22, No. 10. (2004), pp. 1218-9.
    by B Palsson
    posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:41 as read
  • Unraveling the biochemistry of sweet and umami tastes
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 39. (2004), pp. 13972-3.
    by GE Dubois
    posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:09 as read
  • Electrical detection of single viruses
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 39. (2004), pp. 14017-22.
    by F Patolsky, G Zheng, O Hayden, M Lakadamyali, X Zhuang, CM Lieber
    posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:09 as read
  • Effects of the Geometry of the Immunological Synapse on the Delivery of Effector Molecules
    Biophysical Journal, Vol. 87, No. 4. (2004), pp. 2215-20.
    by D Coombs, B Goldstein
    posted to systems_biology diffusion biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:09 as read
  • Enzymes: By chance, or by design?
    Nature, Vol. 431, No. 7007. (2004), pp. 396-7.
    by P Ball
    posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:09 as read
  • The Ups and Downs of Modeling the Cell Cycle
    Current Biology, Vol. 14, No. 18. (2004), pp. R771-R777.
    by NT Ingolia, AW Murray
    posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:09 as read
  • Robustness of Cellular Functions
    Cell, Vol. 118, No. 6. (2004), pp. 675-85.
    by J Stelling, U Sauer, Z Szallasi, Iii, J Doyle
    posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:08 as read
  • Reading ratios
    Nature Structural & Molecular Biology, Vol. 11, No. 9. (2004)
    by B Konforti
    posted to cellular_mechanics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:08 as read
  • Intrinsic and extrinsic contributions to stochasticity in gene expression
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 20. (2002), pp. 12795-800.
    by PB Swain, MB Elowitz, ED Siggia
    posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as read
  • Stochastic gene expression as a many-body problem
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 5. (2003), pp. 2374-9.
    by M Sasai, PG Wolynes
    posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as read
  • Stochasticity in Transcriptional Regulation: Origins, Consequences, and Mathematical Representations
    Biophysical Journal, Vol. 81, No. 6. (2001), pp. 3116-36.
    by TB Kepler, TC Elston
    posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as read
  • Fluorescence correlation spectroscopy with high-order and dual-color correlation to probe nonequilibrium steady states
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 9. (2004), pp. 2828-33.
    by H Qian, EL Elson
    posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as read
  • Mechanisms of noise-resistance in genetic oscillators
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 9. (2002), pp. 5988-92.
    by JMG Vilar, HY Kueh, N Barkai, S Leibler
    posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as read
  • Robustness of circadian rhythms with respect to molecular noise
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 2. (2002), pp. 673-8.
    by D Gonze, J Halloy, A Goldbeter
    posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as read
  • Modeling a synthetic multicellular clock: Repressilators coupled by quorum sensing
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 30. (2004), pp. 10955-60.
    by Garcia J Ojalvo, MB Elowitz, SH Strogatz
    posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as read
  • Step one in creating a glycocode
    Chemistry & Biology, Vol. 11, No. 7. (2004), pp. 891-2.
    by N Pohl
    posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:26 as read
  • Physical schemata underlying biological pattern formation - examples, issues and strategies
    Physical Biology, Vol. 2, No. 1. (2004), pp. P14-P22.
    by H Levine, Ben E Jacob
    posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:26 as read
  • Using a Quantitative Blueprint to Reprogram the Dynamics of the Flagella Gene Network
    Cell, Vol. 117 (2004), pp. 713-20.
    by S Kalir, U Alon
    posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:10:27 as read
  • Metabolic networks: enzyme function and metabolite structure
    Current Opinion in Structural Biology, Vol. 14, No. 3. (2004), pp. 300-6.
    by V Hatzimanikatis, C Li, JA Ionita, LJ Broadbelt
    posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:10:27 as read
  • The DNA-unwinding mechanism of the ring helicase of bacteriophage T7
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 19. (2004), pp. 7264-9.
    by YJ Jeong, MK Levin, SS Patel
    posted to nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:09:14 as read
  • Critical assessment of a proposed model of Shaker
    FEBS Letters, Vol. 564, No. 3. (2004), pp. 257-263.
    by M Lainã\copyright, DM Papazian, B Roux
    posted to structure biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as read
  • Single-molecule assay reveals strand switching and enhanced processivity of UvrD
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 17. (2004), pp. 6439-6444.
    by MN Dessinges, T Lionnet, XG Xi, D Bensimon, V Croquette
    posted to nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as read
  • Structure and mechanism of the RNA polymerase II transcription machinery
    Nature Structural & Molecular Biology, Vol. 11, No. 5. (2004), pp. 394-403.
    by S Hahn
    posted to structure nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as read
  • Critical assessment of a proposed model of Shaker
    FEBS Letters, Vol. 564, No. 3. (2004), pp. 257-263.
    by M Lainã\copyright, DM Papazian, B Roux
    posted to structure biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as read
  • Single-molecule assay reveals strand switching and enhanced processivity of UvrD
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 17. (2004), pp. 6439-6444.
    by MN Dessinges, T Lionnet, XG Xi, D Bensimon, V Croquette
    posted to nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as read
  • Structure and mechanism of the RNA polymerase II transcription machinery
    Nature Structural & Molecular Biology, Vol. 11, No. 5. (2004), pp. 394-403.
    by S Hahn
    posted to structure nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as read
  • Orchestration of cooperative events in DNA synthesis and repair mechanism unraveled by transition path sampling of DNA polymerase beta's closing
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 16. (2004), pp. 5970-5975.
    by R Radhakrishnan, T Schlick
    posted to nucleic_acids molecular_dynamics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:06:49 as read
  • Functional Stoichiometry and Local Enrichment of Calmodulin Interacting with Ca2+ Channels
    Science, Vol. 304, No. 5669. (2004), pp. 432-435.
    by MX Mori, MG Erickson, DT Yue
    posted to diffusion biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:06:14 as read
  • How viruses enter animal cells
    Science, Vol. 304, No. 5668. (2004), pp. 237-242.
    by AE Smith, A Helenius
    posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:06:14 as read
  • Discovery of a Novel Binding Trench in HIV Integrase
    Journal of Medicinal Chemistry, Vol. 47, No. 8. (2004), pp. 1879-1881.
    by JR Schames, RH Henchman, JS Siegel, CA Sotriffer, H Ni, JA Mccammon
    posted to molecular_dynamics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:56 as read
  • Designing materials for biology and medicine
    Nature, Vol. 428, No. 6982. (2004), pp. 487-492.
    by R Langer, DA Tirrell
    posted to cellular_mechanics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:56 as read
  • The arginine finger of bacteriophage T7 gene 4 helicase: Role in energy coupling
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 13. (2004), pp. 4373-4378.
    by DJ Crampton, S Guo, DE Johnson, CC Richardson
    posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:55 as read
  • Vapor Pressure Osmometry Studies of Osmolyte-Protein Interactions: Implications for the Action of Osmoprotectants in Vivo and for the Interpretation of "Osmotic Stress" Experiments in Vitro
    Biochemistry, Vol. 39, No. 15. (2004), pp. 4455-4471.
    by ES Courtenay, MW Capp, CF Anderson, Jr
    posted to solvation biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:06 as read
  • Roles of Cytoplasmic Osmolytes, Water, and Crowding in the Response of Escherichia coli to Osmotic Stress: Biophysical Basis of Osmoprotection by Glycine Betaine
    Biochemistry, Vol. 42, No. 43. (2003), pp. 12596-12609.
    by S Cayley, Jr
    posted to solvation biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:06 as read
  • Biophysical Characterization of Changes in Amounts and Activity of Escherichia coli Cell and Compartment Water and Turgor Pressure in Response to Osmotic Stress
    Biophysical Journal, Vol. 78, No. 4. (2000), pp. 1748-1764.
    by DS Cayley, HJ Guttman, Jr
    posted to solvation biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:06 as read
  • Large changes in cytoplasmic biopolymer concentration with osmolality indicate that macromolecular crowding may regulate protein-DNA interactions and growth rate in osmotically stressed Escherichia coli K-12
    (2004)
    by S Cayley, Jr
    posted to solvation biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:06 as read
  • Influence of Monovalent Cation Identity on Parvalbumin Divalent Ion-Binding Properties
    Biochemistry, Vol. 43, No. 10. (2004)
    by MT Henzl, JD Larson, S Agah
    posted to electrostatics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:04:46 as read
  • Fluorescence Measurements on the E. coli DNA Polymerase Clamp Loader: Implications for Conformational Changes During ATP and Clamp Binding
    Journal of Molecular Biology, Vol. 336, No. 5. (2004), pp. 1047-1059.
    by ER Goedken, M Levitus, M Johnson, A Johnson, C Bustamante, M O'Donnell, J Kuriyan
    posted to nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:04:29 as read
  • Polymer Models of Protein Stability, Folding, and Interactions
    Biochemistry, Vol. 43, No. 8. (2004), pp. 2141-2154.
    by HX Zhou
    posted to protein_folding misc biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:04:29 as read
  • Computational Modeling of the Catalytic Reaction in Triosephosphate Isomerase
    Journal of Molecular Biology, Vol. 337, No. 1. (2004), pp. 227-239.
    by V Guallar, M Jacobson, A Mcdermott, RA Friesner
    posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:04:29 as read
  • Networking opportunity
    Nature, Vol. 427, No. 6975. (2004), pp. 601-604.
    by I Stewart
    posted to mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:03:37 as read
  • X-Ray Scattering Used to Map the Preferred Collagen Orientation in the Human Cornea and Limbus
    Structure, Vol. 12 (2004), pp. 249-256.
    by H Aghamohammadzadeh, RH Newton, KM Meek
    posted to structure biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:03:37 as read
  • Effect of Crowding on ProteinâProtein Association Rates: Fundamental Differences between Low and High Mass Crowding Agents
    Journal of Molecular Biology, Vol. 336, No. 3. (2004), pp. 763-774.
    by N Kozer, G Schreiber
    posted to diffusion biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:02:10 as read
  • Summing up the noise in gene networks
    Nature, Vol. 427, No. 6973. (2004), pp. 415-418.
    by J Paulsson
    posted to systems_biology multiscale mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:02:10 as read
  • Mechanically driven ATP synthesis by F1-ATPase
    Nature, Vol. 427, No. 6973. (2004), pp. 465-468.
    by H Itoh, A Takahashi, K Adachi, H Noji, R Yasuda, M Yoshida, Jr
    posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:02:10 as read
  • The 2B domain of the Escherichia coli Rep protein is not required for DNA helicase activity
    Proc Natl Acad Sci U S A, Vol. 99, No. 25. (2002), pp. 16006-11.
    by W Cheng, KM Brendza, GH Gauss, S Korolev, G Waksman, TM Lohman
    posted to structure nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:01:00 as read
  • Structure of the DNA binding domain of E. coli SSB bound to ssDNA
    Nature Structural Biology, Vol. 7, No. 8. (2000), pp. 648-52.
    by S Raghunathan, AG Kozlov, TM Lohman, G Waksman
    posted to structure nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:01:00 as read
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