softsimus profile

Recent Activity

• 20:54: posted Inhibition of human liver catechol-O-methyltransferase by tea catechins and their metabolites: Structure-activity relationship and molecular-modeling studies
• 20:34: posted Bead--bead interaction parameters in dissipative particle dynamics: Relation to bead-size, solubility parameter, and surface tension

• 22:13: posted Lipid Rafts: Feeling is Believing
• 22:10: posted The equilibrium of phosphatidylcholine-cholesterol in monolayers at the air/water interface
• 22:08: posted Gating Mechanisms of Mechanosensitive Channels of Large Conductance, II: Systematic Study of Conformational Transitions
• 21:55: posted On the Construction and Comparison of Difference Schemes
• 21:54: posted Self-consistent dissipative particle dynamics algorithm
• 21:54: posted A stochastic Trotter integration scheme for dissipative particle dynamics
• 21:45: posted Dynamical regimes in the dissipative particle dynamics model
• 21:45: posted Hydrodynamics from dissipative particle dynamics
• 21:44: posted Scaling of the time-dependent self-diffusion coefficient and the propagation of hydrodynamic interactions
• 21:44: posted Dissipative particle dynamics for a harmonic chain: A first-principles derivation
• 21:44: posted Thermodynamically Admissible Form for Discrete Hydrodynamics
• 21:43: posted Thermodynamically consistent mesoscopic fluid particle model
• 21:43: posted Smoothed dissipative particle dynamics
• 21:42: posted Smoothed particle hydrodynamics model for phase separating fluid mixtures. I. General equations
• 20:47: posted Shadow mass and the relationship between velocity and momentum in symplectic numerical integration
• 20:46: posted Molecular simulations of mesoscopic bilayer phases
• 20:43: posted Configurational Temperature in Membrane Simulations Using Dissipative Particle Dynamics
• 19:44: posted RSH/Smith-Lemli-Opitz Syndrome: A Multiple Congenital Anomaly/Mental Retardation Syndrome due to an Inborn Error of Cholesterol Biosynthesis
• 19:43: posted Simulation study of lateral diffusion in lipid-sterol bilayer mixtures
• 19:43: posted The permeability and the effect of acyl-chain length for phospholipid bilayers containing cholesterol: theory and experiment
• 19:42: posted Condensed complexes of cholesterol and phospholipids
• 19:42: posted Cholesterol Rules: DIRECT OBSERVATION OF THE COEXISTENCE OF TWO FLUID PHASES IN NATIVE PULMONARY SURFACTANT MEMBRANES AT PHYSIOLOGICAL TEMPERATURES
• 19:41: posted Role of cholesterol in lipid raft formation: lessons from lipid model systems
• 19:40: posted The Effect of Sterol Structure on Membrane Lipid Domains Reveals How Cholesterol Can Induce Lipid Domain Formation
• 19:40: posted Cholesterol-phospholipid interactions, the liquid-ordered phase and lipid rafts in model and biological membranes
• 19:39: posted From Lanosterol to Cholesterol: Structural Evolution and Differential Effects on Lipid Bilayers
• 19:38: posted Why do worms need cholesterol?
• 19:37: posted Lipids do influence protein function--the hydrophobic matching hypothesis revisited
• 19:37: posted What's so special about cholesterol?
• 19:34: posted A Quantitative Coarse-Grain Model for Lipid Bilayers
• 19:33: posted Identification of Possible Sources of Nanotoxicity from Carbon Nanotubes Inserted into Membrane Bilayers Using Membrane Interaction Quantitative Structure−Activity Relationship Analysis
• 19:32: posted Counterion Distribution and ζ-Potential in PAMAM Dendrimer
• 19:30: posted An Equilibrium Method for Continuous-Flow Cell Sorting Using Dielectrophoresis
• 19:29: posted Differential Effects of Cholesterol and its Immediate Biosynthetic Precursors on Membrane Organization
• 19:29: posted The MARTINI Coarse-Grained Force Field: Extension to Proteins
• 19:27: posted Effects of Carboxylate-Modified, “Green” Inulin Biopolymers on the Crystal Growth of Calcium Oxalate
• 19:23: posted Monitoring Biological Membrane-Potential Changes: A CI QM/MM Study
• 19:22: posted Energetics of Cholesterol Transfer between Lipid Bilayers.
• 19:20: posted Constrained Isothermal-Isobaric Molecular Dynamics with Full Atomic Virial
• 19:19: posted Structure of Aqueous Proline via Parallel Tempering Molecular Dynamics and Neutron Diffraction
• 19:18: posted Understanding Modern Molecular Dynamics: Techniques and Applications
• 17:02: posted Structure and internal dynamics of a side chain liquid crystalline polymer in various phases by molecular dynamics simulations: A step towards coarse graining

• 19:37: posted Plasma membrane-associated proteins are clustered into islands attached to the cytoskeleton.
• 19:36: posted Coupled composition-deformation phase-field method for multicomponent lipid membranes
• 19:36: posted Modulated phases in multicomponent fluid membranes
• 19:36: posted Coupling Field Theory with Mesoscopic Dynamical Simulations of Multicomponent Lipid Bilayers
• 19:36: posted Nonequilibrium Raftlike Membrane Domains under Continuous Recycling
• 19:35: posted Direct Observation of Lipid Domains in Free-Standing Bilayers Using Two-Photon Excitation Fluorescence Microscopy
• 19:34: posted Why are lipid rafts not observed in vivo?
• 19:33: posted Raft Partitioning and Dynamic Behavior of Human Placental Alkaline Phosphatase in Giant Unilamellar Vesicles
• 19:33: posted Organization in Lipid Membranes Containing Cholesterol
• 19:33: posted Sphingolipid-Cholesterol Rafts Diffuse as Small Entities in the Plasma Membrane of Mammalian Cells
• 19:31: posted THE STATE OF LIPID RAFTS: From Model Membranes to Cells
• 19:25: posted Domain Formation in the Plasma Membrane: Roles of Nonequilibrium Lipid Transport and Membrane Proteins

• 20:38: posted General Properties of Certain Non-linear Integro-Differential Equations
• 20:37: posted Asymptotic laws for tagged-particle motion in glassy systems
• 19:26: posted Connecting microscopic simulations with kinetically constrained models of glasses
• 19:25: posted Critical dynamics of ballistic and Brownian particles in a heterogeneous environment
• 19:23: posted Subdiffusive dynamics of a liquid crystal in the isotropic phase
• 19:22: posted Guides to solving the glass transition problem
• 19:22: posted Following microscopic motion in a two-dimensional glass-forming binary fluid
• 19:21: posted Dynamical Heterogeneities in a Supercooled Lennard-Jones Liquid
• 19:20: posted Is Random Close Packing of Spheres Well Defined?
• 19:16: posted COLLOIDAL SYSTEMS: Playing Tricks with Designer "Atoms"
• 19:15: posted Multiple Glassy States in a Simple Model System
• 19:12: posted Structural Relaxation of Polymer Glasses at Surfaces, Interfaces, and In Between
• 19:11: posted Insights into Phases of Liquid Water from Study of Its Unusual Glass-Forming Properties
• 19:10: posted Formation of Glasses from Liquids and Biopolymers
• 19:09: posted Simulations of aging and plastic deformation in polymer glasses

• 22:30: posted Lateral interactions among phosphatidylcholine and phosphatidylethanolamine head groups in phospholipid monolayers and bilayers
• 22:28: posted Modeling Compact Denatured States of Proteins
• 22:26: posted Stabilization of Proteins in Confined Spaces
• 22:25: posted Solvent denaturation and stabilization of globular proteins
• 19:17: posted Molecular dynamics simulation of a phosphatidylglycerol membrane.
• 08:04: posted A model of hydrogen bond formation in phosphatidylethanolamine bilayers

• 22:49: posted Computer simulation of short-range repulsion between supported phospholipid membranes
• 22:48: posted Temperature dependence of the short-range repulsion between hydrated phospholipid membranes: A computer simulation study
• 22:28: posted A molecular-dynamics simulation study on the dependence of Lennard-Jones gas-liquid phase diagram on the long-range part of the interactions
• 21:53: posted Translational diffusion of flexible lipid chains in a Langmuir monolayer: A dynamic Monte Carlo study
• 21:47: posted Lateral diffusion studied by pulsed field gradient NMR on oriented lipid membranes
• 21:46: posted Lipid domains as obstacles for lateral diffusion in supported bilayers probed at different time and length scales by two-dimensional exchange and field gradient solid state NMR
• 21:44: posted Phase Behavior and Nanoscale Structure of Phospholipid Membranes Incorporated with Acylated C14-Peptides
• 21:35: posted Phase and Mixing Behavior in Two-Component Lipid Bilayers: A Molecular Dynamics Study in DLPC/DSPC Mixtures
• 21:30: posted Non-Brownian Diffusion of Membrane Molecules in Nanopatterned Supported Lipid Bilayers
• 21:26: posted Atomistic simulations of the interaction between lipid bilayers and substrates
• 21:21: posted Interactions of Lipid Bilayers with Supports: A Coarse-Grained Molecular Simulation Study

• 19:55: posted Inhomogeneity effects on the structure and dynamics of water at the surface of a membrane: A computer simulation study

• 22:27: posted Molecular Dynamics Study of the Lung Surfactant Peptide SP-B1-25 with DPPC Monolayers: Insights into Interactions and Peptide Position and Orientation
• 22:26: posted Atomic force microscopy study of functional and dysfunctional pulmonary surfactant films. I. Micro- and nano- structures of functional pulmonary surfactant films and the effect of SP-A
• 22:25: posted The Molecular Mechanism of Monolayer-Bilayer Transformations of Lung Surfactant from Molecular Dynamics Simulations
• 22:25: posted Molecular Dynamics Simulations of the Anchoring and Tilting of the Lung-Surfactant Peptide SP-B1-25 in Palmitic Acid Monolayers
• 22:23: posted Molecular Dynamics Simulations of Model Trans-Membrane Peptides in Lipid Bilayers: A Systematic Investigation of Hydrophobic Mismatch

• 23:19: posted Direct plant gene delivery with a poly(amidoamine) dendrimer

• 18:21: posted Molecular Dynamics Simulations of Water with Novel Shell-Model Potentials

• 21:13: posted Fluorescence-quenching and resonance energy transfer studies of lipid microdomains in model and biological membranes (Review)
• 21:12: posted Lipid rafts: contentious only from simplistic standpoints
• 21:10: posted Invisible Rafts at Work
• 21:09: posted Transient confinement zones: A type of lipid raft?
• 21:08: posted Rafts: Scale-Dependent, Active Lipid Organization at the Cell Surface
• 21:08: posted Lipid raft heterogeneity: an enigma
• 21:08: posted Molecular Dynamics and Interactions for Creation of Stimulation-Induced Stabilized Rafts from Small Unstable Steady-State Rafts
• 21:06: posted Critical Factors for Detection of Biphasic Changes in Membrane Properties at Specific Sterol Mole Fractions for Maximal Superlattice Formation
• 20:37: posted Effect of Cholesterol and Ergosterol on the Compressibility and Volume Fluctuations of Phospholipid-Sterol Bilayers in the Critical Point Region - A Molecular Acoustic and Calorimetric Study
• 20:36: posted Zwitterionic Phospholipids and Sterols Modulate Antimicrobial Peptide-Induced Membrane Destabilization
• 20:26: posted Ergosterol in POPC Membranes: Physical Properties and Comparison with Structurally Similar Sterols
• 20:26: posted Universal Behavior of Membranes with Sterols
• 18:38: posted Molecular motor-induced instabilities and crosslinkers determine biopolymer organization.
• 18:36: posted Pattern formation in active cytoskeletal networks
• 18:33: posted Effects of cross-links on motor-mediated filament organization

• 19:27: posted Accurate Free Energies of Micelle Formation
• 03:32: posted Prediction of an Autocatalytic Replication Mechanism for Micelle Formation

• 22:19: posted Self-Propulsion of Nematic Drops: Novel Phase Separation Dynamics in Impurity-Doped Nematogens