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Nøkkelord: genome [821 articles]

Nye artikler klassifisert med nøkkelordet genome.
  • Genome instability: a mechanistic view of its causes and consequences.
    Nat Rev Genet (29 January 2008)
    by Andrés Aguilera, Belén Gómez-González
    posted to genome mutation sequence by zwang on 2008-02-19 01:22:05 as **
  • The evolution of genome compression and genomic novelty in RNA viruses.
    Genome Res (4 September 2007)
    by Robert Belshaw, Oliver G G Pybus, Andrew Rambaut
  • A Genome-wide RNA Interference Screen Reveals that Variant Histones Are Necessary for Replication-Dependent Histone Pre-mRNA Processing
    Molecular Cell, Vol. 28, No. 4. (30 November 2007), pp. 692-699.
    by Eric J Wagner, Brandon D Burch, Ashley C Godfrey, Harmony R Salzler, Robert J Duronio, William F Marzluff
    posted to genome histone rna by zwang on 2007-12-10 05:03:46 as *
  • Predicting Protein Function with Hierarchical Phylogenetic Profiles: The Gene3D Phylo-Tuner Method Applied to Eukaryotic Genomes
    PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e237.
    by Juan A Ranea, Corin Yeats, Alastair Grant, Christine A Orengo
  • Evolutionary Genomics: Transdomain Gene Transfers
    Current Biology, Vol. 17, No. 21. (6 November 2007), pp. R935-R936.
    by Seth R Bordenstein
    posted to domain evolution genome by zwang on 2007-11-16 06:44:29 as ** along with 3 people skhadar mblwhoi hpaces
  • Complete Chemical Synthesis, Assembly, and Cloning of a Mycoplasma genitalium Genome
    Science (24 January 2008), 1151721.
    by Daniel G Gibson, Gwynedd A Benders, Cynthia Andrews-Pfannkoch, Evgeniya A Denisova, Holly Baden-Tillson, Jayshree Zaveri, Timothy B Stockwell, Anushka Brownley, David W Thomas, Mikkel A Algire, Chuck Merryman, Lei Young, Vladimir N Noskov, John I Glass, Craig J Venter, Clyde A Hutchison, Hamilton O Smith
  • Single-Molecule DNA Sequencing of a Viral Genome
    Science, Vol. 320, No. 5872. (4 April 2008), pp. 106-109.
    by Timothy D Harris, Phillip R Buzby, Hazen Babcock, Eric Beer, Jayson Bowers, Ido Braslavsky, Marie Causey, Jennifer Colonell, James Dimeo, William J Efcavitch, Eldar Giladi, Jaime Gill, John Healy, Mirna Jarosz, Dan Lapen, Keith Moulton, Stephen R Quake, Kathleen Steinmann, Edward Thayer, Anastasia Tyurina, Rebecca Ward, Howard Weiss, Zheng Xie
  • Networks of genomic co-occurrence capture characteristics of human influenza A (H3N2) evolution
    Genome Res. (21 November 2007), gr.6969007.
    by Xiangjun Du, Zhuo Wang, Aiping Wu, Lin Song, Yang Cao, Haiying Hang, Taijiao Jiang
  • Assessing the Significance of Conserved Genomic Aberrations Using High Resolution Genomic Microarrays
    PLoS Genetics, Vol. 3, No. 8. (1 August 2007), e143.
    by Mitchell Guttman, Carolyn Mies, Katarzyna Dudycz-Sulicz, Sharon J Diskin, Don A Baldwin, Christian J Stoeckert, Gregory R Grant
  • Genome Analysis of Minibacterium massiliensis Highlights the Convergent Evolution of Water-Living Bacteria
    PLoS Genetics, Vol. 3, No. 8. (1 August 2007), e138.
    by Stéphane Audic, Catherine Robert, Bernard Campagna, Hugues Parinello, Jean-Michel Claverie, Didier Raoult, Michel Drancourt
    posted to bacterial evolution genome by zwang on 2007-09-03 15:16:47 as *
  • Identification and Characterization of Cell Type-Specific and Ubiquitous Chromatin Regulatory Structures in the Human Genome.
    PLoS Genet, Vol. 3, No. 8. (17 August 2007)
    by Hualin Xi, Hennady P P Shulha, Jane M M Lin, Teresa R R Vales, Yutao Fu, David M M Bodine, Ronald D G D McKay, Josh G G Chenoweth, Paul J J Tesar, Terrence S S Furey, Bing Ren, Zhiping Weng, Gregory E E Crawford
  • Integrating physical and genetic maps: from genomes to interaction networks
    Nature Reviews Genetics, Vol. 8, No. 9., pp. 699-710.
    by Andreas Beyer, Sourav Bandyopadhyay, Trey Ideker
  • An in Vivo Map of the Yeast Protein Interactome
    Science, Vol. 320, No. 5882. (13 June 2008), pp. 1465-1470.
    by Kirill Tarassov, Vincent Messier, Christian R Landry, Stevo Radinovic, Mercedes M Molina, Igor Shames, Yelena Malitskaya, Jackie Vogel, Howard Bussey, Stephen W Michnick
  • Genome-Wide Mapping of in Vivo Protein-DNA Interactions
    Science (31 May 2007), 1141319.
    by David S Johnson, Ali Mortazavi, Richard M Myers, Barbara Wold
  • The neoselectionist theory of genome evolution
    PNAS, Vol. 104, No. 20. (15 May 2007), pp. 8385-8390.
    by Giorgio Bernardi
  • The evolution of human influenza A viruses from 1999 to 2006 - a complete genome study
    Virology Journal, Vol. 5 (07 March 2008), 40.
    by Karoline Bragstad, Lars P Nielsen, Anders Fomsgaard
    posted to evolution genome influenza virus by zwang on 2008-03-20 13:25:30 as **
  • Comparing whole genomes using DNA microarrays
    Nat Rev Genet, Vol. 9, No. 4. (April 2008), pp. 291-302.
    by David Gresham, Maitreya J Dunham, David Botstein
  • Approaches to comparative sequence analysis: towards a functional view of vertebrate genomes
    Nat Rev Genet, Vol. 9, No. 4. (April 2008), pp. 303-313.
    by Elliott H Margulies, Ewan Birney
  • PDZ Domain Binding Selectivity Is Optimized Across the Mouse Proteome
    Science, Vol. 317, No. 5836. (20 July 2007), pp. 364-369.
    by Michael A Stiffler, Jiunn R Chen, Viara P Grantcharova, Ying Lei, Daniel Fuchs, John E Allen, Lioudmila A Zaslavskaia, Gavin Macbeath
    posted to binding domain genome interaction proteome by zwang on 2007-07-23 07:12:01 as **** along with 1 person carlk
  • Improvisation in evolution of genes and genomes: whose structure is it anyway?
    Current opinion in structural biology (17 May 2008)
    by Boris E E Shakhnovich, Eugene I I Shakhnovich
    posted to genome gene evolution by zwang on 2008-06-16 03:50:16 as ** along with 2 people marck cabbagesofdoom
  • A Computational Approach to the Functional Screening of Genomes
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e174.
    by Davide Chiarugi, Pierpaolo Degano, Roberto Marangoni
  • Organization and Evolution of Primate Centromeric DNA from Whole-Genome Shotgun Sequence Data
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e181.
    by Can Alkan, Mario Ventura, Nicoletta Archidiacono, Mariano Rocchi, Cenk S Sahinalp, Evan E Eichler
  • A Universal Framework for Regulatory Element Discovery across All Genomes and Data Types.
    Mol Cell, Vol. 28, No. 2. (26 October 2007), pp. 337-350.
  • Integration of Genome and Chromatin Structure with Gene Expression Profiles To Predict c-MYC Recognition Site Binding and Function.
    PLoS Comput Biol, Vol. 3, No. 4. (6 April 2007)
    by Yili Chen, Thomas W W Blackwell, Ji Chen, Jing Gao, Angel W W Lee, David J J States
  • The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions
    Science, Vol. 318, No. 5848. (12 October 2007), pp. 245-250.
    by Sabeeha S Merchant, Simon E Prochnik, Olivier Vallon, Elizabeth H Harris, Steven J Karpowicz, George B Witman, Astrid Terry, Asaf Salamov, Lillian K Fritz-Laylin, Laurence Marechal-Drouard, Wallace F Marshall, Liang-Hu Qu, David R Nelson, Anton A Sanderfoot, Martin H Spalding, Vladimir V Kapitonov, Qinghu Ren, Patrick Ferris, Erika Lindquist, Harris Shapiro, Susan M Lucas, Jane Grimwood, Jeremy Schmutz, Pierre Cardol, Heriberto Cerutti, Guillaume Chanfreau, Chun-Long Chen, Valerie Cognat, Martin T Croft, Rachel Dent, Susan Dutcher, Emilio Fernandez, Hideya Fukuzawa, David Gonzalez-Ballester, Diego Gonzalez-Halphen, Armin Hallmann, Marc Hanikenne, Michael Hippler, William Inwood, Kamel Jabbari, Ming Kalanon, Richard Kuras, Paul A Lefebvre, Stephane D Lemaire, Alexey V Lobanov, Martin Lohr, Andrea Manuell, Iris Meier, Laurens Mets, Maria Mittag, Telsa Mittelmeier, James V Moroney, Jeffrey Moseley, Carolyn Napoli, Aurora M Nedelcu, Krishna Niyogi, Sergey V Novoselov, Ian T Paulsen, Greg Pazour, Saul Purton, Jean-Philippe Ral, Diego M Riano-Pachon, Wayne Riekhof, Linda Rymarquis, Michael Schroda, David Stern, James Umen, Robert Willows, Nedra Wilson, Sara L Zimmer, Jens Allmer, Janneke Balk, Katerina Bisova, Chong-Jian Chen, Marek Elias, Karla Gendler, Charles Hauser, Mary R Lamb, Heidi Ledford, Joanne C Long, Jun Minagawa, Dudley M Page, Junmin Pan, Wirulda Pootakham, Sanja Roje, Annkatrin Rose, Eric Stahlberg, Aimee M Terauchi, Pinfen Yang, Steven Ball, Chris Bowler, Carol L Dieckmann, Vadim N Gladyshev, Pamela Green, Richard Jorgensen, Stephen Mayfield, Bernd Mueller-Roeber, Sathish Rajamani, Richard T Sayre, Peter Brokstein, Inna Dubchak, David Goodstein, Leila Hornick, Wayne Y Huang, Jinal Jhaveri, Yigong Luo, Diego Martinez, Wing C Ngau, Bobby Otillar, Alexander Poliakov, Aaron Porter, Lukasz Szajkowski, Gregory Werner, Kemin Zhou, Igor V Grigoriev, Daniel S Rokhsar, Arthur R Grossman
  • High-Resolution Profiling of Histone Methylations in the Human Genome
    Cell, Vol. 129, No. 4. (18 May 2007), pp. 823-837.
    by Artem Barski, Suresh Cuddapah, Kairong Cui, Tae-Young Roh, Dustin E Schones, Zhibin Wang, Gang Wei, Iouri Chepelev, Keji Zhao
    posted to genome histone methylation by zwang on 2007-06-14 02:07:15 as ** along with 1 person epigenetics
  • Principles of Genome Evolution in the Drosophila melanogaster Species Group
    PLoS Biology, Vol. 5, No. 6. (1 June 2007), e152.
    by José M Ranz, Damien Maurin, Yuk S Chan, Marcin von Grotthuss, Ladeana W Hillier, John Roote, Michael Ashburner, Casey M Bergman
  • The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics
    Nat Biotech, Vol. 25, No. 10. (October 2007), pp. 1127-1133.
    by Andrew R Jones, Michael Miller, Ruedi Aebersold, Rolf Apweiler, Catherine A Ball, Alvis Brazma, James Degreef, Nigel Hardy, Henning Hermjakob, Simon J Hubbard, Peter Hussey, Mark Igra, Helen Jenkins, Randall K Julian, Kent Laursen, Stephen G Oliver, Norman W Paton, Susanna-Assunta Sansone, Ugis Sarkans, Christian J Stoeckert, Chris F Taylor, Patricia L Whetzel, Joseph A White, Paul Spellman, Angel Pizarro
    posted to function genome insilico modeling by zwang on 2007-10-11 17:03:39 as ** along with 3 people alanrw jyuh jfr
  • Identification of Host Proteins Required for HIV Infection Through a Functional Genomic Screen
    Science (10 January 2008), 1152725.
    by Abraham L Brass, Derek M Dykxhoorn, Yair Benita, Nan Yan, Alan Engelman, Ramnik J Xavier, Judy Lieberman, Stephen J Elledge
  • InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic genomes
    BMC Bioinformatics, Vol. 8 (26 October 2007), 414.
    by Jingchun Sun, Yan Sun, Guohui Ding, Qi Liu, Chuan Wang, Youyu He, Tieliu Shi, Yixue Li, Zhongming Zhao
  • Life-history traits drive the evolutionary rates of mammalian coding and noncoding genomic elements
    Proceedings of the National Academy of Sciences (11 December 2007), 0705658104.
    by Sergey I Nikolaev, Juan I Montoya-Burgos, Konstantin Popadin, Leila Parand, Elliott H Margulies, National, Stylianos E Antonarakis
  • Evolution of genes and genomes on the Drosophila phylogeny
    Nature, Vol. 450, No. 7167. (November 2007), pp. 203-218.
  • Human disease classification in the postgenomic era: A complex systems approach to human pathobiology
    Mol Syst Biol, Vol. 3 (10 July 2007)
    by Joseph Loscalzo, Isaac Kohane, Albert-Laszlo Barabasi
  • Molecular and Genomic Data Identify the Closest Living Relative of Primates
    Science, Vol. 318, No. 5851. (2 November 2007), pp. 792-794.
    by Jan E Janecka, Webb Miller, Thomas H Pringle, Frank Wiens, Annette Zitzmann, Kristofer M Helgen, Mark S Springer, William J Murphy
    posted to evolution genome by zwang on 2007-11-05 14:33:23 as ** along with 4 people aprasad dchughes djkt hpaces
  • Complete genome sequence of the myxobacterium Sorangium cellulosum
    Nature Biotechnology, Vol. 25, No. 11. (28 October 2007), pp. 1281-1289.
    by Susanne Schneiker, Olena Perlova, Olaf Kaiser, Klaus Gerth, Aysel Alici, Matthias O Altmeyer, Daniela Bartels, Thomas Bekel, Stefan Beyer, Edna Bode, Helge B Bode, Christoph J Bolten, Jomuna V Choudhuri, Sabrina Doss, Yasser A Elnakady, Bettina Frank, Lars Gaigalat, Alexander Goesmann, Carolin Groeger, Frank Gross, Lars Jelsbak, Lotte Jelsbak, Jörn Kalinowski, Carsten Kegler, Tina Knauber, Sebastian Konietzny, Maren Kopp, Lutz Krause, Daniel Krug, Bukhard Linke, Taifo Mahmud, Rosa Martinez-Arias, Alice C Mchardy, Michelle Merai, Folker Meyer, Sascha Mormann, Jose Muñoz-Dorado, Juana Perez, Silke Pradella, Shwan Rachid, Günter Raddatz, Frank Rosenau, Christian Rückert, Florenz Sasse, Maren Scharfe, Stephan C Schuster, Garret Suen, Anke Treuner-Lange, Gregory J Velicer, Frank-Jörg Vorhölter, Kira J Weissman, Roy D Welch, Silke C Wenzel, David E Whitworth, Susanne Wilhelm, Christoph Wittmann, Helmut Blöcker, Alfred Pühler, Rolf Müller
  • Towards multidimensional genome annotation
    Nature Reviews Genetics, Vol. 7, No. 2., pp. 130-141.
    by Jennifer L Reed, Iman Famili, Ines Thiele, Bernhard O Palsson
  • CpG Island Mapping by Epigenome Prediction.
    PLoS Comput Biol, Vol. 3, No. 6. (8 June 2007)
    by Christoph Bock, Jörn Walter, Martina Paulsen, Thomas Lengauer
  • Adaptive Mutations in Bacteria: High Rate and Small Effects
    Science, Vol. 317, No. 5839. (10 August 2007), pp. 813-815.
    by Lilia Perfeito, Lisete Fernandes, Catarina Mota, Isabel Gordo
  • Alignment Uncertainty and Genomic Analysis
    Science, Vol. 319, No. 5862. (25 January 2008), pp. 473-476.
    by Karen M Wong, Marc A Suchard, John P Huelsenbeck
  • Widespread Lateral Gene Transfer from Intracellular Bacteria to Multicellular Eukaryotes
    Science (30 August 2007), 1142490.
    by Julie C Hotopp, Michael E Clark, Deodoro C Oliveira, Jeremy M Foster, Peter Fischer, Monica C Torres, Jonathan D Giebel, Nikhil Kumar, Nadeeza Ishmael, Shiliang Wang, Jessica Ingram, Rahul V Nene, Jessica Shepard, Jeffrey Tomkins, Stephen Richards, David J Spiro, Elodie Ghedin, Barton E Slatko, Herve Tettelin, John H Werren
  • Identifying clusters of functionally related genes in genomes.
    Bioinformatics (19 January 2007)
    by Gangman Yi, Sing-Hoi H Sze, Michael R R Thon
  • Phylogenetic exploration of bacterial genomic rearrangements
    Bioinformatics, Vol. 23, No. 9. (1 May 2007), pp. 1172-1174.
    by Romain Fremez, Thomas Faraut, Gwennaele Fichant, Jerome Gouzy, Yves Quentin
    posted to bacterial genome phylogeny by zwang on 2007-05-10 08:13:26 as ** along with 1 person operon
  • Phenotype ontologies: the bridge between genomics and evolution
    Trends in Ecology & Evolution, Vol. 22, No. 7. (July 2007), pp. 345-350.
    by Paula M Mabee, Michael Ashburner, Quentin Cronk, Georgios V Gkoutos, Melissa Haendel, Erik Segerdell, Chris Mungall, Monte Westerfield
    posted to evolution genome phenotype by zwang on 2007-08-18 08:56:44 as *** along with 1 person natstreet
  • A Whole-Genome Association Study of Major Determinants for Host Control of HIV-1
    Science, Vol. 317, No. 5840. (17 August 2007), pp. 944-947.
    by Jacques Fellay, Kevin V Shianna, Dongliang Ge, Sara Colombo, Bruno Ledergerber, Mike Weale, Kunlin Zhang, Curtis Gumbs, Antonella Castagna, Andrea Cossarizza, Alessandro Cozzi-Lepri, Andrea De Luca, Philippa Easterbrook, Patrick Francioli, Simon Mallal, Javier Martinez-Picado, Jose M Miro, Niels Obel, Jason P Smith, Josiane Wyniger, Patrick Descombes, Stylianos E Antonarakis, Norman L Letvin, Andrew J Mcmichael, Barton F Haynes, Amalio Telenti, David B Goldstein
  • Viral Evolution in the Genomic Age
    PLoS Biology, Vol. 5, No. 10. (1 October 2007), e278.
    by Edward C Holmes
    posted to evolution genome virus by zwang on 2007-10-08 18:55:54 as * along with 3 people dayjm dullhunk djkt
  • RNA-mediated epigenetic programming of a genome-rearrangement pathway
    Nature (28 November 2007)
    by Mariusz Nowacki, Vikram Vijayan, Yi Zhou, Klaas Schotanus, Thomas G Doak, Laura F Landweber
  • Genome Transplantation in Bacteria: Changing One Species to Another
    Science (28 June 2007), 1144622.
    by Carole Lartigue, John I Glass, Nina Alperovich, Rembert Pieper, Prashanth P Parmar, Hutchison, Hamilton O Smith, Craig J Venter
  • Genome Duplication, a Trait Shared by 22,000 Species of Ray-Finned Fish
    Genome Res., Vol. 13, No. 3. (1 March 2003), pp. 382-390.
    by John S Taylor, Ingo Braasch, Tancred Frickey, Axel Meyer, Yves Van de Peer
    posted to genome gene-duplication evolution by zhlei on 2007-01-17 14:56:42 as **
  • The genome sequence of Drosophila melanogaster.
    Science, Vol. 287, No. 5461. (24 March 2000), pp. 2185-2195.
    by MD Adams, SE Celniker, RA Holt, CA Evans, JD Gocayne, PG Amanatides, SE Scherer, PW Li, RA Hoskins, RF Galle, RA George, SE Lewis, S Richards, M Ashburner, SN Henderson, GG Sutton, JR Wortman, MD Yandell, Q Zhang, LX Chen, RC Brandon, YH Rogers, RG Blazej, M Champe, BD Pfeiffer, KH Wan, C Doyle, EG Baxter, G Helt, CR Nelson, GL Gabor, JF Abril, A Agbayani, HJ An, C Andrews-Pfannkoch, D Baldwin, RM Ballew, A Basu, J Baxendale, L Bayraktaroglu, EM Beasley, KY Beeson, PV Benos, BP Berman, D Bhandari, S Bolshakov, D Borkova, MR Botchan, J Bouck, P Brokstein, P Brottier, KC Burtis, DA Busam, H Butler, E Cadieu, A Center, I Chandra, JM Cherry, S Cawley, C Dahlke, LB Davenport, P Davies, B de Pablos, A Delcher, Z Deng, AD Mays, I Dew, SM Dietz, K Dodson, LE Doup, M Downes, S Dugan-Rocha, BC Dunkov, P Dunn, KJ Durbin, CC Evangelista, C Ferraz, S Ferriera, W Fleischmann, C Fosler, AE Gabrielian, NS Garg, WM Gelbart, K Glasser, A Glodek, F Gong, JH Gorrell, Z Gu, P Guan, M Harris, NL Harris, D Harvey, TJ Heiman, JR Hernandez, J Houck, D Hostin, KA Houston, TJ Howland, MH Wei, C Ibegwam, M Jalali, F Kalush, GH Karpen, Z Ke, JA Kennison, KA Ketchum, BE Kimmel, CD Kodira, C Kraft, S Kravitz, D Kulp, Z Lai, P Lasko, Y Lei, AA Levitsky, J Li, Z Li, Y Liang, X Lin, X Liu, B Mattei, TC McIntosh, MP McLeod, D McPherson, G Merkulov, NV Milshina, C Mobarry, J Morris, A Moshrefi, SM Mount, M Moy, B Murphy, L Murphy, DM Muzny, DL Nelson, DR Nelson, KA Nelson, K Nixon, DR Nusskern, JM Pacleb, M Palazzolo, GS Pittman, S Pan, J