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Diego_Pradas protein_dynamics [14 articles]

Artikler nylig sendt til Diego_Pradas bibliotek klassifisert med nøkkelordet protein_dynamics. You can also see everyone's protein_dynamics.
  • Theory of Kinetic Partitioning in Protein Folding (With Application to Prions)
    (25 Jun 1996)
    by VI Abkevich, AM Gutin, EI Shakhnovich
    posted to transition_path protein_dynamics by Diego_Prada on 2008-08-11 21:58:28 as ** along with 1 person and 1 group maurizio_prion prionbiology
  • Thermodynamics and kinetics simulations of multi-time-scale processes for complex systems
    International Reviews in Physical Chemistry, Vol. 27, No. 2. (2008), pp. 201-227.
    by Yi Q Gao, Lijiang Yang, Yubo Fan, Qiang Shao
    posted to transition_path protein_dynamics free-energy csn complex_systems by Diego_Prada on 2008-08-10 20:26:43 as *****
  • Annealed importance sampling of dileucine peptide
    (3 Apr 2007)
    by Edward Lyman, Daniel M Zuckerman
    posted to coarse-grained protein_dynamics struct_decorr by Diego_Prada on 2008-04-21 10:15:40 as **
  • Demonstrated convergence of the equilibrium ensemble for a fast united-residue protein model
    (24 Mar 2007)
    by Marty F Ytreberg, Svetlana, Daniel M Zuckerman
    posted to coarse-grained protein_dynamics struct_decorr by Diego_Prada on 2008-04-21 10:13:08 as **
  • Network and graph analyses of folding free energy surfaces
    Current Opinion in Structural Biology, Vol. 16, No. 1. (February 2006), pp. 71-78.
    by Amedeo Caflisch
    posted to free-energy protein_dynamics by Diego_Prada on 2008-04-11 19:59:28 as ** along with 4 people apaydin bilab mtw jlh64
  • Hierarchical analysis of conformational dynamics in biomolecules: transition networks of metastable states.
    J Chem Phys, Vol. 126, No. 15. (21 April 2007)
    by F Noé, I Horenko, C Schütte, JC Smith
    posted to markov protein_dynamics by Diego_Prada on 2008-03-30 16:22:35 as ** along with 2 people toerst choonpeng
  • Calculation of the distribution of eigenvalues and eigenvectors in Markovian state models for molecular dynamics
    The Journal of Chemical Physics, Vol. 126, No. 24. (2007)
    by Nina S Hinrichs, Vijay S Pande
    posted to markov protein_dynamics by Diego_Prada on 2008-03-30 16:17:53 as **
  • Statistically optimal analysis of samples from multiple equilibrium states
    (9 Jan 2008)
    by Michael R Shirts, John D Chodera
    posted to markov protein_dynamics stochastic_processes by Diego_Prada on 2008-03-30 16:14:48 as ** along with 1 person and 1 group sobolevnrm baker-group
  • Automatic discovery of metastable states for the construction of Markov models of macromolecular conformational dynamics.
    J Chem Phys, Vol. 126, No. 15. (21 April 2007)
    by JD Chodera, N Singhal, VS Pande, KA Dill, WC Swope
    posted to markov protein_dynamics by Diego_Prada on 2008-03-30 16:13:45 as read along with 1 person allmensch
  • Exploration of the free-energy surface of a three-helix peptide with stochastic optimization methods
    International Journal of Quantum Chemistry, Vol. 99, No. 5. (2004), pp. 854-863.
    by T Herges, A Schug, W Wenzel
    posted to free-energy protein_dynamics by Diego_Prada on 2008-02-19 10:19:16 as **
  • Free-energy landscape of the villin headpiece in an all-atom force field.
    Structure (Camb), Vol. 13, No. 4. (April 2005), pp. 661-668.
    by T Herges, W Wenzel
    posted to free-energy protein_dynamics by Diego_Prada on 2008-02-19 10:10:21 as *** along with 2 people nigham fjc1
  • Collective deformations in proteins determined by a mode analysis of molecular dynamics trajectories
    Polymer, Vol. 43, No. 2. (January 2002), pp. 431-439.
    by Pemra Doruker, Ivet Bahar, Canan Baysal, Burak Erman
    posted to gnm pca protein_dynamics by Diego_Prada on 2008-02-18 17:48:28 as read
  • The structural de-correlation time: A robust statistical measure of convergence of biomolecular simulations
    (18 Feb 2007)
    by Edward Lyman, Daniel M Zuckerman
    posted to protein_dynamics proteins struct_decorr by Diego_Prada on 2008-02-18 17:18:27 as read
  • Dynamics of essential collective motions in proteins: Theory
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 76, No. 5. (2007)
    by Maria Stepanova
    posted to pca protein_dynamics proteins by Diego_Prada on 2008-02-17 12:43:10 as ** along with 2 people and 1 group choonpeng sobolevnrm baker-group
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