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GeeSharpMinors library [242 articles]

Nye artikler sendt til GeeSharpMinors bibliotek.
  • Assessing probe-specific dye and slide biases in two-color microarray Data
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Ruixiao Lu, Geun C Lee, Michael Shultz, Chris Dardick, Kihong Jung, Jirapa Phetsom, Yi Jia, Robert Rice, Zelanna Goldberg, Patrick Schnable, Pamela Ronald, David Rocke
    posted to microarray by GeeSharpMinor on 2008-07-20 01:25:44 as *****
  • ALLPATHS: De novo assembly of whole-genome shotgun microreads.
    Genome Res (13 March 2008)
    by Jonathan Butler, Iain Maccallum, Michael Kleber, Ilya A A Shlyakhter, Matthew K K Belmonte, Eric S S Lander, Chad Nusbaum, David B B Jaffe
    posted to rna-seq by GeeSharpMinor on 2008-07-19 00:12:19 as ** along with 9 people and 1 group iris42 tharris GustavoLacerda sharpton Neeperando jwhitney stajich azazello hpaces Berkeley Mycology
  • Mammalian RNA polymerase II core promoters: insights from genome-wide studies
    Nature Reviews Genetics, Vol. 8, No. 6. (08 May 2007), pp. 424-436.
    by Albin Sandelin, Piero Carninci, Boris Lenhard, Jasmina Ponjavic, Yoshihide Hayashizaki, David A Hume
    posted to rna-seq by GeeSharpMinor on 2008-07-19 00:03:42 as ** along with 5 people and 3 groups dchughes xiaobeizhao zwang cabbagezs cisevol G4ID Genetics-of-Gambling cis-regulatory-evolution
  • Genome-wide transcription and the implications for genomic organization.
    Nat Rev Genet (8 May 2007)
    by Philipp Kapranov, Aarron T T Willingham, Thomas R R Gingeras
    posted to rna-seq by GeeSharpMinor on 2008-07-19 00:01:20 as ** along with 15 people and 5 groups Ema maximilianh jyuh balicea xico dchughes kengg sebastien_vigneau zwang ajgentles asddd hanansh antonkratz vietanh0 inesdesantiago Bioinformatics WetBiology G4ID Plantandetc Genetics-of-Gambling
  • Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing.
    BioTechniques, Vol. 45, No. 1. (July 2008), pp. 81-94.
    by R Morin, M Bainbridge, A Fejes, M Hirst, M Krzywinski, T Pugh, H McDonald, R Varhol, S Jones, M Marra
    posted to rna-seq by GeeSharpMinor on 2008-07-18 23:58:52 as **
  • The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing
    Science (1 May 2008), 1158441.
    by Ugrappa Nagalakshmi, Zhong Wang, Karl Waern, Chong Shou, Debasish Raha, Mark Gerstein, Michael Snyder
    posted to rna-seq by GeeSharpMinor on 2008-07-18 23:52:28 as ** along with 10 people and 1 group urgi faion semrich biomcgary djkt chad_davis Retchless gjuggler caseybrown stajich Berkeley Mycology
  • Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis
    Cell, Vol. 133, No. 3. (2 May 2008), pp. 523-536.
    by Ryan Lister, Ronan C O'Malley, Julian Tonti-Filippini, Brian D Gregory, Charles C Berry, Harvey A Millar, Joseph R Ecker
    posted to rna-seq by GeeSharpMinor on 2008-07-18 23:52:03 as ** along with 2 people caseybrown megraw
  • SpliceCenter: a suite of web-based bioinformatic applications for evaluating the impact of alternative splicing on RT-PCR, RNAi, microarray, and peptide-based studies.
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Michael Ryan, Barry Zeeberg, Natash Caplen, James Cleland, Ari Kahn, Hongfang Liu, John Weinstein
    posted to transcriptome genomics bioinformatics by GeeSharpMinor on 2008-07-18 20:27:18 as **
  • Global mRNA changes in microarray experiments - supplmentary
    posted to microarray by GeeSharpMinor on 2008-07-15 20:54:30 as **
  • CellTrack: an open-source software for cell tracking and motility analysis
    Bioinformatics, Vol. 24, No. 14. (15 July 2008), pp. 1647-1649.
    by Ahmet Sacan, Hakan Ferhatosmanoglu, Huseyin Coskun
    posted to microscopy bioinformatics by GeeSharpMinor on 2008-07-15 20:50:21 as **
  • Global mRNA changes in microarray experiments
    Nature Biotechnology, Vol. 26, No. 7., pp. 741-742.
    by Matthew A Hannah, Henning Redestig, Andrea Leisse, Lothar Willmitzer
    posted to microarray by GeeSharpMinor on 2008-07-15 20:49:12 as **
  • Yale image finder
    Bioinformatics
    posted to microscopy bioinformatics by GeeSharpMinor on 2008-07-15 20:47:25 as **
  • Immunity to malaria: more questions than answers
    Nature Immunology, Vol. 9, No. 7., pp. 725-732.
    by Jean Langhorne, Francis M Ndungu, Anne-Marit Sponaas, Kevin Marsh
    posted to malaria immunology by GeeSharpMinor on 2008-07-15 20:44:29 as **
  • Preclinical profiling of the immunogenicity of a two-component subunit malaria vaccine candidate based on virosome technology.
    Human vaccines, Vol. 4, No. 2. (r 2008), pp. 106-114.
    by SL Okitsu, MS Mueller, M Amacker, D Vogel, N Westerfeld, JA Robinson, R Zurbriggen, G Pluschke
    posted to vaccine methods malaria by GeeSharpMinor on 2008-07-15 20:43:10 as **
  • Biological implications of glycosaminoglycan interactions with haemopoietic cytokines
    Immunology and Cell Biology (July 2008)
    by Deirdre R Coombe
    posted to review immunology by GeeSharpMinor on 2008-07-15 13:55:09 as **
  • MalHaploFreq: A computer programme for estimating malaria haplotype frequencies from blood samples
    Malaria Journal, Vol. 7, No. 1. (2008)
    by Ian Hastings, Thomas Smith
    posted to methods malaria bioinformatics by GeeSharpMinor on 2008-07-15 13:53:15 as **
  • Evaluation of immunoglobulin purification methods and their impact on quality and yield of antigen-specific antibodies
    Malaria Journal, Vol. 7, No. 1. (2008)
    by Elke B Leitner, Ryan Mease, Elizabeth Duncan, Farhat Khan, John Waitumbi, Evelina Angov
    posted to methods malaria immunology by GeeSharpMinor on 2008-07-15 00:05:22 as **
  • An automated home-built low-cost fermenter suitable for large-scale bacterial expression of proteins in E. coli
    Biotechniques, Vol. 45, No. 2. (August 2008)
    by Uwe Riek, Tuerk Roland, Theo Wallimann, Uwe Schlattner, Dietbert Neumann
    posted to protein-production methods by GeeSharpMinor on 2008-07-14 16:38:55 as **
  • GenCLiP: a software program for clustering gene lists by literature profiling and constructing gene co-occurrence networks related to custom keywords
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Zhong X Huang, Hui Y Tian, Zhen F Hu, Yi B Zhou, Jin Zhao, Kai T Yao
    posted to literature-mining analysis by GeeSharpMinor on 2008-07-13 16:27:35 as **
  • A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome
    Science (3 July 2008), 1160342.
    by Marc Sultan, Marcel H Schulz, Hugues Richard, Alon Magen, Andreas Klingenhoff, Matthias Scherf, Martin Seifert, Tatjana Borodina, Aleksey Soldatov, Dmitri Parkhomchuk, Dominic Schmidt, Sean O'Keeffe, Stefan Haas, Martin Vingron, Hans Lehrach, Marie-Laure Yaspo
    posted to transcriptome rna-seq by GeeSharpMinor on 2008-07-12 04:11:43 as ** along with 7 people Ema kjglennie balicea dh0000 caseybrown reyez oelemento
  • Molecular biology: Power sequencing
    Nature, Vol. 453, No. 7199. (26 June 2008), pp. 1197-1198.
    by Brenton R Graveley
    posted to transcriptome rna-seq by GeeSharpMinor on 2008-07-11 17:35:59 as ** along with 5 people myourshaw reyez GustavoLacerda dullhunk megraw
  • Production and sequence validation of a complete full length ORF collection for the pathogenic bacterium Vibrio cholerae.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 11. (18 March 2008), pp. 4364-4369.
    by A Rolfs, WR Montor, SS Yoon, Y Hu, B Bhullar, F Kelley, S McCarron, DA Jepson, B Shen, E Taycher, SE Mohr, D Zuo, J Williamson, J Mekalanos, J Labaer
    posted to protein-production cloning by GeeSharpMinor on 2008-07-11 04:07:02 as **
  • A biomedically enriched collection of 7000 human ORF clones.
    PLoS ONE, Vol. 3, No. 1. (2008)
    by A Rolfs, Y Hu, L Ebert, D Hoffmann, D Zuo, N Ramachandran, J Raphael, F Kelley, S McCarron, DA Jepson, B Shen, MM Baqui, J Pearlberg, E Taycher, C DeLoughery, A Hoerlein, B Korn, J LaBaer
    posted to protein-production methods by GeeSharpMinor on 2008-07-11 04:02:46 as **
  • A novel approach to sequence validating protein expression clones with automated decision making
    BMC Bioinformatics, Vol. 8 (13 June 2007), 198.
    by Elena Taycher, Andreas Rolfs, Yanhui Hu, Dongmei Zuo, Stephanie E Mohr, Janice Williamson, Joshua Labaer
    posted to protein-production methods bioinformatics by GeeSharpMinor on 2008-07-11 04:00:54 as ** along with 2 people jyuh thstoeber
  • Real-time in vivo imaging of transgenic bioluminescent blood stages of rodent malaria parasites in mice.
    Nat Protoc, Vol. 1, No. 1. (2006), pp. 476-485.
    by B Franke-Fayard, AP Waters, CJ Janse
    posted to microscopy methods malaria by GeeSharpMinor on 2008-07-07 02:44:18 as ** along with 1 person becarmson
  • Immunological processes in malaria pathogenesis
    Nature Reviews Immunology, Vol. 5, No. 9. (01 September 2005), pp. 722-735.
    by Louis Schofield, Georges E Grau
    posted to pathogenesis malaria by GeeSharpMinor on 2008-07-07 02:42:20 as **
  • Clinical features and pathogenesis of severe malaria
    Trends in Parasitology, Vol. 20, No. 12. (December 2004), pp. 597-603.
    by Claire L Mackintosh, James G Beeson, Kevin Marsh
    posted to pathogenesis malaria by GeeSharpMinor on 2008-07-07 02:40:02 as **
  • Dynamic personalities of proteins
    Nature, Vol. 450, No. 7172. (12 December 2007), pp. 964-972.
    by Katherine Henzler-Wildman, Dorothee Kern
    posted to structure proteomics by GeeSharpMinor on 2008-07-05 15:02:53 as ** along with 11 people and 1 group higueruelo chad_davis allmensch choonpeng rsantana cjeans sobolevnrm wilbur mijam kjell phoenixzxl baker-group
  • Catch bonds govern adhesion through L-selectin at threshold shear
    J. Cell Biol., Vol. 166, No. 6. (13 September 2004), pp. 913-923.
    by Tadayuki Yago, Jianhua Wu, Diana C Wey, Arkadiusz G Klopocki, Cheng Zhu, Rodger P Mcever
    posted to binding by GeeSharpMinor on 2008-07-05 05:11:54 as **
  • Adhesive properties of the isolated amino-terminal domain of platelet glycoprotein Ibalpha in a flow field.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 96, No. 14. (6 July 1999), pp. 7837-7842.
    by P Marchese, E Saldívar, J Ware, ZM Ruggeri
    posted to binding by GeeSharpMinor on 2008-07-05 04:50:49 as **
  • Adhesion through L-selectin requires a threshold hydrodynamic shear.
    Nature, Vol. 379, No. 6562. (18 January 1996), pp. 266-269.
    by EB Finger, KD Puri, R Alon, MB Lawrence, UH von Andrian, TA Springer
    posted to binding by GeeSharpMinor on 2008-07-05 04:50:21 as **
  • Bacterial Adhesion to Target Cells Enhanced by Shear Force
    Cell, Vol. 109, No. 7. (28 June 2002), pp. 913-923.
    by Wendy E Thomas, Elena Trintchina, Manu Forero, Viola Vogel, Evgeni V Sokurenko
    posted to modeling binding by GeeSharpMinor on 2008-07-05 04:25:58 as **
  • Interdomain Interaction in the FimH Adhesin of Escherichia coli Regulates the Affinity to Mannose
    J. Biol. Chem., Vol. 282, No. 32. (10 August 2007), pp. 23437-23446.
    by Pavel Aprikian, Veronika Tchesnokova, Brian Kidd, Olga Yakovenko, Vladimir Yarov-Yarovoy, Elena Trinchina, Viola Vogel, Wendy Thomas, Evgeni Sokurenko
    posted to modeling by GeeSharpMinor on 2008-07-05 04:20:36 as **
  • Elevated Shear Stress Protects Escherichia coli Cells Adhering to Surfaces via Catch Bonds from Detachment by Soluble Inhibitors
    Appl. Environ. Microbiol., Vol. 72, No. 4. (1 April 2006), pp. 3005-3010.
    by Lina M Nilsson, Wendy E Thomas, Evgeni V Sokurenko, Viola Vogel
    posted to modeling by GeeSharpMinor on 2008-07-05 03:33:44 as **
  • Weak Rolling Adhesion Enhances Bacterial Surface Colonization.
    J Bacteriol (22 December 2006)
    by Brett N N Anderson, Albert M M Ding, Lina M M Nilsson, Kaoru Kusuma, Veronika Tchesnokova, Viola Vogel, Evgeni V V Sokurenko, Wendy E E Thomas
    posted to modeling by GeeSharpMinor on 2008-07-05 03:32:30 as ** along with 1 person aswin
  • Reduction of Worm Fecundity and Canine Host Blood Loss Mediates Protection against Hookworm Infection Elicited by Vaccination with Recombinant Ac-16
    Clin. Vaccine Immunol., Vol. 14, No. 3. (1 March 2007), pp. 281-287.
    by Ricardo T Fujiwara, Bin Zhan, Susana Mendez, Alex Loukas, Lilian L Bueno, Yan Wang, Jordan Plieskatt, Yelena Oksov, Sara Lustigman, Maria E Bottazzi, Peter Hotez, Jeffrey M Bethony
    posted to vaccine immunology by GeeSharpMinor on 2008-07-04 17:57:38 as **
  • Parasite Burden and CD36-Mediated Sequestration Are Determinants of Acute Lung Injury in an Experimental Malaria Model.
    PLoS pathogens, Vol. 4, No. 5. (May 2008)
    by FE Lovegrove, SA Gharib, L Peña-Castillo, SN Patel, JT Ruzinski, TR Hughes, WC Liles, KC Kain
    posted to microarray malaria by GeeSharpMinor on 2008-07-04 17:32:02 as ** along with 1 person becarmson
  • Distinct and stage specific nuclear factors regulate the expression of falcipains, Plasmodium falciparum cysteine proteases
    BMC Molecular Biology, Vol. 9 (14 May 2008), 47.
    by Sujatha Sunil, Virander S Chauhan, Pawan Malhotra
    posted to malaria genomics by GeeSharpMinor on 2008-07-04 17:29:27 as ** along with 1 person becarmson
  • A Salmonella locus that controls resistance to microbicidal proteins from phagocytic cells.
    Science (New York, N.Y.), Vol. 243, No. 4894 Pt 1. (24 February 1989), pp. 1059-1062.
    by PI Fields, EA Groisman, F Heffron
    posted to immunology by GeeSharpMinor on 2008-07-03 19:48:28 as **
  • Protection of human breast cancer cells from complement-mediated lysis by expression of heterologous CD59.
    Clinical and experimental immunology, Vol. 115, No. 1. (January 1999), pp. 13-18.
    by J Yu, T Caragine, S Chen, BP Morgan, AB Frey, S Tomlinson
    posted to immunology by GeeSharpMinor on 2008-07-03 19:46:38 as **
  • The kinetics of formation of native ribonuclease during oxidation of the reduced polypeptide chain.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 47 (15 September 1961), pp. 1309-1314.
    by CB ANFINSEN, E HABER, M SELA, FH WHITE
    posted to structure proteomics by GeeSharpMinor on 2008-07-03 18:43:05 as **
  • alpha(+)-Thalassemia Protects against Anemia Associated with Asymptomatic Malaria: Evidence from Community-Based Surveys in Tanzania and Kenya.
    The Journal of infectious diseases (26 June 2008)
    by Jacobien Veenemans, Pauline E A E Andang'o, Erasto V V Mbugi, Rob J J Kraaijenhagen, David L L Mwaniki, Frank P P Mockenhaupt, Susanne Roewer, Raimos M M Olomi, John F F Shao, Jos W M van der W Meer, Huub F J F Savelkoul, Hans Verhoef
    posted to malaria clinical-associations by GeeSharpMinor on 2008-06-29 04:32:59 as **
  • The severity of malarial anaemia in Plasmodium chabaudi infections of BALB/c mice is determined independently of the number of circulating parasites
    Malaria Journal, Vol. 7 (25 April 2008), 68.
    by Tracey J Lamb, Jean Langhorne
    posted to malaria clinical-associations by GeeSharpMinor on 2008-06-28 23:03:44 as **
  • A regulatable transgene expression system for cultured Plasmodium falciparum parasites
    Malaria Journal, Vol. 7 (20 May 2008), 86.
    by Christian Epp, Dima Raskolnikov, Kirk W Deitsch
    posted to methods malaria by GeeSharpMinor on 2008-06-28 23:01:29 as ** along with 1 person becarmson
  • Distinct pattern of class and subclass antibodies in immune complexes of children with cerebral malaria and severe malarial anaemia
    Parasite Immunology, Vol. 30, No. 6-7. (July 2008), pp. 334-341.
    by EK Mibei, WO Otieno, ASS Orago, JA Stoute
    posted to malaria immunology by GeeSharpMinor on 2008-06-28 22:59:24 as **
  • Retention of Plasmodium falciparum ring-infected erythrocytes in the slow, open micro-circulation of the human spleen.
    Blood (25 June 2008)
    by Innocent Safeukui, Jean-Michel M Correas, Valentine Brousse, Deborah Hirt, Guillaume Deplaine, Sebastien Mule, Mickael Lesurtel, Nicolas Goasguen, Alain Sauvanet, Anne Couvelard, Sophie Kerneis, Huot Khun, Ines Vigan-Womas, Catherine Ottone, Thierry Jo J Molina, Jean-Marc M Treluyer, Odile Mercereau-Puijalon, Genevieve Milon, Peter H H David, Pierre A A Buffet
    posted to pathogenesis malaria by GeeSharpMinor on 2008-06-28 15:30:13 as **
  • Isoform discovery by targeted cloning, 'deep-well' pooling and parallel sequencing
    Nat Meth, Vol. 5, No. 7. (July 2008), pp. 597-600.
    by Kourosh Salehi-Ashtiani, Xinping Yang, Adnan Derti, Weidong Tian, Tong Hao, Chenwei Lin, Kathryn Makowski, Lei Shen, Ryan R Murray, David Szeto, Nadeem Tusneem, Douglas R Smith, Michael E Cusick, David E Hill, Frederick P Roth, Marc Vidal
    posted to transcriptome by GeeSharpMinor on 2008-06-28 15:29:06 as ** along with 1 person jyuh
  • Mapping and quantifying mammalian transcriptomes by RNA-Seq.
    Nature methods (30 May 2008)
    by Ali Mortazavi, Brian A A Williams, Kenneth McCue, Lorian Schaeffer, Barbara Wold
    posted to transcriptome rna-seq by GeeSharpMinor on 2008-06-28 15:28:50 as ** along with 4 people myourshaw caseybrown megraw vplagnol
  • Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
    Nature (18 May 2008)
    by Brian T Wilhelm, Samuel Marguerat, Stephen Watt, Falk Schubert, Valerie Wood, Ian Goodhead, Christopher J Penkett, Jane Rogers, Jürg Bähler
    posted to transcriptome rna-seq by GeeSharpMinor on 2008-06-28 15:28:31 as ** along with 5 people and 1 group myourshaw jyuh caseybrown jonathanjacobs djkt Molecular Biology
  • Stem cell transcriptome profiling via massive-scale mRNA sequencing.
    Nature methods (30 May 2008)
    by Nicole Cloonan, Alistair R R R Forrest, Gabriel Kolle, Brooke B A B Gardiner, Geoffrey J J Faulkner, Mellissa K K Brown, Darrin F F Taylor, Anita L L Steptoe, Shivangi Wani, Graeme Bethel, Alan J J Robertson, Andrew C C Perkins, Stephen J J Bruce, Clarence C C Lee, Swati S S Ranade, Heather E E Peckham, Jonathan M M Manning, Kevin J J McKernan, Sean M M Grimmond
    posted to transcriptome rna-seq by GeeSharpMinor on 2008-06-28 15:28:12 as ** along with 3 people myourshaw caseybrown megraw
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