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TOchis library [281 articles]

Nye artikler sendt til TOchis bibliotek.
  • DNA Ligase IV and XRCC4 Form a Stable Mixed Tetramer That Functions Synergistically with Other Repair Factors in a Cell-free End-joining System
    J. Biol. Chem., Vol. 275, No. 44. (27 October 2000), pp. 34787-34796.
    by Kyung-Jong Lee, Juren Huang, Yoshihiko Takeda, William S Dynan
    posted to xrcc4 nhej dnaligaseiv by TOchi on 2008-10-12 21:04:55 as **
  • Identification of DNA-PKcs phosphorylation sites in XRCC4 and effects of mutations at these sites on DNA end joining in a cell-free system
    DNA Repair, Vol. 3, No. 3. (March 2004), pp. 267-276.
    by K Lee
    posted to xrcc4 nhej dna-pkcs by TOchi on 2008-10-12 21:02:40 as **
  • Structural and functional analysis of the Crb2-BRCT2 domain reveals distinct roles in checkpoint signaling and DNA damage repair.
    Genes & development, Vol. 22, No. 15. (1 August 2008), pp. 2034-2047.
    by ML Kilkenny, AS Doré, SM Roe, K Nestoras, JC Ho, FZ Watts, LH Pearl
    posted to brct by TOchi on 2008-10-11 15:21:12 as **
  • Epstein-Barr virus-associated B-cell lymphoma in a patient with DNA ligase IV (LIG4) syndrome
    American Journal of Medical Genetics Part A, Vol. 143A, No. 7. (2007), pp. 742-745.
    by Nariaki Toita, Norikazu Hatano, Satoru Ono, Masafumi Yamada, Ryoji Kobayashi, Ichiro Kobayashi, Nobuaki Kawamura, Motohiko Okano, Akira Satoh, Atsuko Nakagawa, Koichi Ohshima, Masanobu Shindoh, Tsuyoshi Takami, Kunihiko Kobayashi, Tadashi Ariga
    posted to lig4syndrome dnaligaseiv by TOchi on 2008-10-04 16:28:31 as **
  • Relation between the phase separation and the crystallization in protein solutions
    Physical Review E, Vol. 56, No. 1. (1 July 1997), R67.
    by Shinpei Tanaka, Masahiko Yamamoto, Kohzo Ito, Reinosuke Hayakawa, Mitsuo Ataka
    posted to proteincrystallography phaseseparation by TOchi on 2008-09-23 15:52:52 as **
  • Protein Phase Behavior in Aqueous Solutions: Crystallization, Liquid-Liquid Phase Separation, Gels, and Aggregates
    Biophys. J., Vol. 94, No. 2. (15 January 2008), pp. 570-583.
    by Andre C Dumetz, Aaron M Chockla, Eric W Kaler, Abraham M Lenhoff
    posted to proteincrystallography by TOchi on 2008-09-23 15:33:12 as **
  • Quaternary structures of tumor suppressor p53 and a specific p53–DNA complex
    Proceedings of the National Academy of Sciences, Vol. 104, No. 30. (24 July 2007), pp. 12324-12329.
    by Henning Tidow, Roberto Melero, Efstratios Mylonas, Stefan M Freund, Guenter J Grossmann, José M Carazo, Dmitri I Svergun, Mikel Valle, Alan R Fersht
    posted to saxs p53 by TOchi on 2008-09-13 12:19:08 as **
  • Multiple Conformations of E. coli Hsp90 in Solution: Insights into the Conformational Dynamics of Hsp90
    Structure, Vol. 16, No. 5. (7 May 2008), pp. 755-765.
    by Kristin A Krukenberg, Friedrich Förster, Luke M Rice, Andrej Sali, David A Agard
    posted to saxs hsp90 by TOchi on 2008-09-13 12:15:03 as ** along with 1 person cactus
  • Quaternary Structure of Flavorubredoxin as Revealed by Synchrotron Radiation Small-Angle X-Ray Scattering
    Structure, Vol. 16, No. 9. (10 September 2008), pp. 1428-1436.
    by Maxim V Petoukhov, João B Vicente, Peter B Crowley, Maria A Carrondo, Miguel Teixeira, Dmitri I Svergun
    posted to saxs by TOchi on 2008-09-13 12:09:45 as **
  • A comparison of refined X-ray structures of hydrogenated and perdeuterated rat γE-crystallin in H2O and D2O
    Acta Crystallographica Section D Biological Crystallography
    by Artero
    posted to sans by TOchi on 2008-09-12 17:07:22 as **
  • The structure of the KinA-Sda complex suggests an allosteric mechanism of histidine kinase inhibition.
    J Mol Biol, Vol. 368, No. 2. (27 April 2007), pp. 407-420.
    by AE Whitten, DA Jacques, B Hammouda, T Hanley, GF King, JM Guss, J Trewhella, DB Langley
    posted to saxs sans by TOchi on 2008-09-11 18:29:21 as ** along with 1 person CameronNeylon
  • Lymphocyte-Specific Compensation for XLF/Cernunnos End-Joining Functions in V(D)J Recombination
    Molecular Cell, Vol. 31, No. 5. (5 September 2008), pp. 631-640.
    by Gang Li, Frederick W Alt, Hwei-Ling Cheng, James W Brush, Peter H Goff, Mike M Murphy, Sonia Franco, Yu Zhang, Shan Zha
    posted to xlf vdjrecombination by TOchi on 2008-09-09 15:37:37 as **
  • Loss of DNA ligase IV prevents recognition of DNA by double-strand break repair proteins XRCC4 and XLF
    Nucl. Acids Res. (9 September 2008), gkn552.
    by Sumithra Jayaram, Gary Ketner, Noritaka Adachi, Les A Hanakahi
    posted to xrcc4 xlf nhej dnaligaseiv by TOchi on 2008-09-09 13:08:36 as **
  • pK values of the ionizable groups of proteins
    Protein Sci, Vol. 15, No. 5. (1 May 2006), pp. 1214-1218.
    by Richard L Thurlkill, Gerald R Grimsley, Martin J Scholtz, Nick C Pace
    posted to pk by TOchi on 2008-09-05 21:49:51 as ** along with 2 people jwm czarnecka
  • DNA looping by Ku and the DNA-dependent protein kinase.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 94, No. 9. (29 April 1997), pp. 4267-4272.
    by RB Cary, SR Peterson, J Wang, DG Bear, EM Bradbury, DJ Chen
    posted to ku dna-pkcs dna-pk by TOchi on 2008-09-03 13:41:27 as **
  • ATR: an essential regulator of genome integrity
    Nature Reviews Molecular Cell Biology, Vol. 9, No. 8. (02 July 2008), pp. 616-627.
    by Karlene A Cimprich, David Cortez
    posted to dnarepair atr by TOchi on 2008-09-01 16:32:58 as ** along with 2 people dchughes jyuh
  • Homologous recombination in DNA repair and DNA damage tolerance.
    Cell Res (1 January 2008)
    by Xuan Li, Wolf-Dietrich D Heyer
    posted to hr by TOchi on 2008-09-01 16:30:20 as ** along with 2 people dbikard Petersarkies
  • Changes in Biomolecular Conformation Seen by Small Angle X-ray Scattering
    Chem. Rev., Vol. 101 (2001), pp. 1763-1778.
    by Sebastian Doniach
    posted to saxs by TOchi on 2008-08-29 15:14:45 as **
  • New Developments in Direct Shape Determination from Small-Angle Scattering. 2. Uniqueness
    Acta Crystallographica Section A, Vol. 52, No. 3. (May 1996), pp. 419-426.
    by DI Svergun, VV Volkov, MB Kozin, HB Stuhrmann
    posted to saxs uniqueness by TOchi on 2008-08-29 15:01:47 as **
  • Intrinsically unstructured proteins
    Trends in Biochemical Sciences, Vol. 27, No. 10. (1 October 2002), pp. 527-533.
    by Peter Tompa
    posted to disorderedprotein by TOchi on 2008-08-28 15:53:46 as ** along with 1 person hsekiguc
  • Sequence complexity of disordered protein
    Proteins: Structure, Function, and Genetics, Vol. 42, No. 1. (2001), pp. 38-48.
    by Pedro Romero, Zoran Obradovic, Xiaohong Li, Ethan C Garner, Celeste J Brown, Keith A Dunker
    posted to disorderedprotein by TOchi on 2008-08-28 15:52:49 as ** along with 1 person and 1 group i000 YY1
  • DNA repair of clustered lesions in mammalian cells: involvement of non-homologous end-joining
    Nucl. Acids Res., Vol. 36, No. 15. (1 September 2008), pp. 4872-4882.
    by Svitlana Malyarchuk, Reneau Castore, Lynn Harrison
    posted to nhej by TOchi on 2008-08-27 12:51:15 as **
  • Protein Disorder: Conformational Distribution of the Flexible Linker in a Chimeric Double Cellulase
    Biophys. J., Vol. 88, No. 4. (1 April 2005), pp. 2823-2832.
    by Ingemar von Ossowski, Julian T Eaton, Mirjam Czjzek, Stephen J Perkins, Torben P Frandsen, Martin Schulein, Pierre Panine, Bernard Henrissat, Veronique Receveur-Brechot
    posted to saxs by TOchi on 2008-08-26 20:43:20 as **
  • The N Terminus of Saccharomyces cerevisiae Msh6 Is an Unstructured Tether to PCNA
    Molecular Cell, Vol. 26, No. 4. (25 May 2007), pp. 565-578.
    by Scarlet S Shell, Christopher D Putnam, Richard D Kolodner
    posted to saxs by TOchi on 2008-08-26 20:43:07 as **
  • XRCC1 is phosphorylated by DNA-dependent protein kinase in response to DNA damage
    Nucleic Acids Research, Vol. 34, No. 1. (2006), pp. 32-41.
    by Nicolas Levy, Adeline Martz, Anne Bresson, Catherine Spenlehauer, Gilbert de Murcia, Menissier-De
    posted to dna-pkcs xrcc1 by TOchi on 2008-08-23 09:39:36 as **
  • PI3K-Akt signaling regulates basal, but MAP-kinase signaling regulates radiation-induced XRCC1 expression in human tumor cells in vitro
    DNA Repair, Vol. In Press, Corrected Proof
    by Mahmoud Toulany, Klaus Dittmann, Birgit Fehrenbacher, Martin Schaller, Michael Baumann, Peter H Rodemann
    posted to dna-pkcs xrcc1 by TOchi on 2008-08-23 09:27:01 as **
  • KU70/80, DNA-PKcs, and Artemis are essential for the rapid induction of apoptosis after massive DSB formation
    Cellular Signalling, Vol. In Press, Corrected Proof
    by Takuya Abe, Masamichi Ishiai, Yoshifumi Hosono, Akari Yoshimura, Shusuke Tada, Noritaka Adachi, Hideki Koyama, Minoru Takata, Shunichi Takeda, Takemi Enomoto, Masayuki Seki
    posted to dna-pk dna-pkcs ku by TOchi on 2008-08-21 17:14:43 as **
  • The DNA-dependent protein kinase: the director at the end.
    Immunol Rev, Vol. 200 (August 2004), pp. 132-141.
    by K Meek, S Gupta, DA Ramsden, SP Lees-Miller
    posted to artemis dnaligaseiv dna-pk dna-pkcs ku nhej xrcc4 by TOchi on 2008-08-21 11:19:19 as ** along with 1 person ecattell
  • Interaction of DNA-dependent protein kinase with DNA and with Ku: biochemical and atomic-force microscopy studies.
    The EMBO journal, Vol. 16, No. 16. (15 August 1997), pp. 5098-5112.
    by M Yaneva, T Kowalewski, MR Lieber
    posted to dna-pk dna-pkcs ku nhej by TOchi on 2008-08-21 10:56:14 as **
  • Crowded, cell-like environment induces shape changes in aspherical protein
    Proceedings of the National Academy of Sciences, Vol. 105, No. 33. (2008), pp. 11754-11759.
    by Dirar Homouz, Michael Perham, Antonios Samiotakis, Margaret S Cheung, Pernilla Wittung-Stafshede
    posted to cell-like-environment proteinfolding by TOchi on 2008-08-21 10:05:47 as ** along with 1 person kentsis
  • G.N. Ramachandran (1922-2001)
    Structure, Vol. 9, No. 9. (September 2001), pp. 765-767.
    by Raghupathy Sarma
    posted to ramachandran by TOchi on 2008-08-16 11:33:34 as **
  • Structure-guided Mutational Analysis of the OB, HhH, and BRCT Domains of Escherichia coli DNA Ligase
    J. Biol. Chem., Vol. 283, No. 34. (22 August 2008), pp. 23343-23352.
    by Li K Wang, Pravin A Nair, Stewart Shuman
    posted to dnaligase by TOchi on 2008-08-15 14:57:22 as **
  • Enzymatic Joining of Polynucleotides. XI. REVERSAL OF ESCHERICHIA COLI DEOXYRIBONUCLEIC ACID LIGASE REACTION
    J. Biol. Chem., Vol. 247, No. 19. (10 October 1972), pp. 6370-6372.
    by Paul Modrich, IR Lehman, James C Wang
    posted to dnaligase by TOchi on 2008-08-15 14:54:42 as **
  • Aberrant V(D)J Recombination in Ataxia Telangiectasia Mutated-Deficient Lymphocytes Is Dependent on Nonhomologous DNA End Joining
    J Immunol, Vol. 181, No. 4. (15 August 2008), pp. 2620-2625.
    by Andrea L Bredemeyer, Ching-Yu Huang, Laura M Walker, Craig H Bassing, Barry P Sleckman
    posted to atm nhej vdjrecombination by TOchi on 2008-08-12 12:23:28 as **
  • Structure of the Ku heterodimer bound to DNA and its implications for double-strand break repair
    Nature, Vol. 412, No. 6847. (2001), pp. 607-614.
    by John R Walker, Richard A Corpina, Jonathan Goldberg
    posted to dnarepair ku nhej by TOchi on 2008-08-08 15:18:50 as **
  • Structure and dynamics of suspensions of charged rod-like particles
    Faraday Discuss. Chem. Soc., Vol. 90 (1990), pp. 245-259.
    by Bertram Weyerich, Bruno D'Aguanno, Enrique Canessa, Rudolf Klein
    posted to proteinproteininteraction saxs by TOchi on 2008-08-04 21:58:08 as **
  • Intermolecular forces in biology
    Quarterly Reviews of Biophysics, Vol. 34, No. 02. (2001), pp. 105-267.
    by Deborah Leckband, Jacob Israelachvili
    posted to proteinproteininteraction by TOchi on 2008-08-04 21:26:27 as ** along with 1 person softsimu
  • EGFR Intron Recombination in Human Gliomas: Inappropriate Diversion of V(D)J Recombination?
    Current genomics, Vol. 8, No. 3. (May 2007), pp. 163-170.
    by RA Fenstermaker, MJ Ciesielski
    posted to egfr nhej vdjrecombination by TOchi on 2008-08-03 10:22:30 as **
  • Small-angle scattering studies of biological macromolecules in solution
    Reports on Progress in Physics, Vol. 66, No. 10. (2003), pp. 1735-1782.
    by Dmitri I Svergun, Michel H Koch
    posted to saxs by TOchi on 2008-07-29 12:05:58 as **
  • XRCC4:DNA ligase IV can ligate incompatible DNA ends and can ligate across gaps
    The EMBO Journal, Vol. aop, No. current. (08 February 2007)
    by Jiafeng Gu, Haihui Lu, Brigette Tippin, Noriko Shimazaki, Myron F Goodman, Michael R Lieber
    posted to dnaligaseiv nhej xrcc4 by TOchi on 2008-07-23 22:02:54 as **
  • The ataxia-oculomotor apraxia 1 gene product has a role distinct from ATM and interacts with the DNA strand break repair proteins XRCC1 and XRCC4
    DNA Repair, Vol. 3, No. 11. (2 November 2004), pp. 1493-1502.
    by Paula M Clements, Claire Breslin, Emma D Deeks, Philip J Byrd, Limei Ju, Pawel Bieganowski, Charles Brenner, Maria-Céu Moreira, Taylor, Keith W Caldecott
    posted to aprataxin xrcc1 xrcc4 by TOchi on 2008-07-23 17:20:07 as **
  • Defective DNA Repair and Neurodegenerative Disease
    Cell, Vol. 130, No. 6. (21 September 2007), pp. 991-1004.
    by Ulrich Rass, Ivan Ahel, Stephen C West
    posted to aprataxin neurologicdiseases xrcc4 by TOchi on 2008-07-23 15:27:18 as **
  • The neurodegenerative disease protein aprataxin resolves abortive DNA ligation intermediates
    Nature (10 September 2006)
    by Ivan Ahel, Ulrich Rass, Sherif F El-Khamisy, Sachin Katyal, Paula M Clements, Peter J Mckinnon, Keith W Caldecott, Stephen C West
    posted to aprataxin dnarepair xrcc4 by TOchi on 2008-07-23 15:20:15 as ** along with 2 people and 1 group DNAReplication giovanni GeschwindLab
  • Chlorella virus DNA ligase: nick recognition and mutational analysis
    Nucl. Acids Res., Vol. 26, No. 2. (15 January 1998), pp. 525-531.
    by V Sriskanda, S Shuman
    posted to dnaligase by TOchi on 2008-07-22 19:40:36 as **
  • Uniqueness of ab initio shape determination in small-angle scattering
    Journal of Applied Crystallography, Vol. 36, No. 3 Part 1. (Jun 2003), pp. 860-864.
    by Vladimir V Volkov, Dmitri I Svergun
    posted to dammin saxs by TOchi on 2008-07-16 17:28:52 as **
  • A mechanism for DNA-PK activation requiring unique contributions from each strand of a DNA terminus and implications for microhomology-mediated nonhomologous DNA end joining
    Nucl. Acids Res., Vol. 36, No. 12. (1 July 2008), pp. 4022-4031.
    by Katherine S Pawelczak, John J Turchi
    posted to dna-pk dna-pkcs ku by TOchi on 2008-07-10 16:03:25 as **
  • Ku70, an essential gene, modulates the frequency of rAAV-mediated gene targeting in human somatic cells
    Proceedings of the National Academy of Sciences, Vol. 105, No. 25. (24 June 2008), pp. 8703-8708.
    by Farjana J Fattah, Natalie F Lichter, Kazi R Fattah, Sehyun Oh, Eric A Hendrickson
    posted to ku70 by TOchi on 2008-06-25 08:29:10 as **
  • The associative nature of adenylyl transfer catalyzed by T4 DNA ligase
    Proceedings of the National Academy of Sciences, Vol. 105, No. 25. (24 June 2008), pp. 8563-8568.
    by Alexey V Cherepanov, Elena V Doroshenko, Jorg Matysik, Simon de Vries, Huub J de Groot
    posted to dna ligase by TOchi on 2008-06-25 08:29:02 as **
  • The endless tale of non-homologous end-joining
    Cell Res, Vol. 18, No. 1. (0000), pp. 114-124.
    by Eric Weterings, David J Chen
    posted to dnaligaseiv dna-pkcs ku nhej xlf xrcc4 by TOchi on 2008-06-20 00:22:20 as ** along with 1 person dvaidpz
  • Glycerol concentrations required for cryoprotection of 50 typical protein crystallization solutions
    Journal of Applied Crystallography, Vol. 29, No. 5. (Oct 1996), pp. 584-587.
    by EF Garman, EP Mitchell
    posted to cryoproteintion proteincrystallography by TOchi on 2008-06-17 10:32:16 as **
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