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baliceas informatics [194 articles]

Artikler nylig sendt til baliceas bibliotek klassifisert med nøkkelordet informatics. You can also see everyone's informatics.
  • The new paradigm of flow cell sequencing
    Genome Res., Vol. 18, No. 6. (1 June 2008), pp. 839-846.
    by Robert A Holt, Steven J Jones
    posted to whole-genomic reviews informatics genome-sequencing genome-prediction by balicea on 2008-07-01 20:14:39 as ** along with 11 people and 1 group dchughes serdarbozdag hpaces tharris reyez caseybrown GustavoLacerda kintoki lp2 stajich tmmurali Berkeley Mycology
  • Optimization in computational systems biology
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Julio Banga
    posted to systems-biology modeling-and-simulation informatics by balicea on 2008-06-30 02:09:50 as ** along with 5 people phoenixzxl biehl reyez jrbanga tmmurali
  • Evolution strategies –A comprehensive introduction
    Natural Computing: an international journal, Vol. 1, No. 1. (May 2002), pp. 3-52.
    by Hans-Georg Beyer, Hans-Paul Schwefel
    posted to reviews informatics evo-computation bio-stat applied-math by balicea on 2008-06-29 21:39:55 as ** along with 5 people sato-ryu lop kutabar ddahlem gagliol
  • Inferring differentiation pathways from gene expression
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i156-164.
    by Ivan G Costa, Stefan Roepcke, Christoph Hafemeister, Alexander Schliep
    posted to morphogenesis informatics genome-prediction gene-expression development by balicea on 2008-06-27 18:31:50 as ** along with 2 people roys renatomilani
  • An in Vivo Map of the Yeast Protein Interactome
    Science, Vol. 320, No. 5882. (13 June 2008), pp. 1465-1470.
    by Kirill Tarassov, Vincent Messier, Christian R Landry, Stevo Radinovic, Mercedes M Molina, Igor Shames, Yelena Malitskaya, Jackie Vogel, Howard Bussey, Stephen W Michnick
    posted to systems-biology informatics genome-interactome evolutionary-proteomics animal-model by balicea on 2008-06-27 05:09:07 as ** along with 3 people zwang renatomilani Petersarkies
  • Polygenes, Risk Prediction, and Targeted Prevention of Breast Cancer
    N Engl J Med, Vol. 358, No. 26. (26 June 2008), pp. 2796-2803.
    by Paul D Pharoah, Antonis C Antoniou, Douglas F Easton, Bruce A Ponder
    posted to machine-learning informatics genome-variation genome-prediction gene-gene diseaseomics by balicea on 2008-06-26 05:25:13 as ** along with 1 person jyuh
  • Predicting disease genes using protein-protein interactions.
    J Med Genet, Vol. 43, No. 8. (August 2006), pp. 691-698.
    by M Oti, B Snel, MA Huynen, HG Brunner
    posted to informatics genome-prediction genome-interactome gene-gene evolutionary-proteomics diseaseomics by balicea on 2008-06-26 05:05:20 as ** along with 4 people xingxu bicko jiny svdate
  • Second Life: an overview of the potential of 3-D virtual worlds in medical and health education
    Health Information and Libraries Journal, Vol. 24, No. 4. (December 2007), pp. 233-245.
    by Boulos, Maged N Kamel, Hetherington, Lee, Wheeler, Steve
    posted to virtual-environment methods informatics by balicea on 2008-06-23 17:26:24 as ** along with 6 people jyuh lynnefox Gaetan amhealy prandall tminze
  • Slaying Monsters for Science
    Science, Vol. 320, No. 5883. (20 June 2008), 1592c.
    by John Bohannon
    posted to virtual-environment methods informatics by balicea on 2008-06-23 17:25:53 as ** along with 2 people scilib dullhunk
  • The Scientific Research Potential of Virtual Worlds
    Science, Vol. 317, No. 5837. (27 July 2007), pp. 472-476.
    by William S Bainbridge
    posted to virtual-environment methods informatics by balicea on 2008-06-23 17:24:50 as ** along with 22 people and 5 groups theus Yanno jyuh cmmorel pajoma brant dullhunk maike brusilovsky sebastien_vigneau zpinhead rsantana shigakiwi kaniko TobiSpecht hannu ziggy yuhc aschmeil Tammy1984 tminze eviil Bioinformatics EisenLab STS ThinkTank Social Web
  • EagleView: a genome assembly viewer for next-generation sequencing technologies.
    Genome research (11 June 2008)
    by Weichun Huang, Gabor T T Marth
    posted to systems-biology informatics genome-sequencing functional-genome evo-tech by balicea on 2008-06-19 17:00:25 as ** along with 5 people GustavoLacerda Neeperando APRegier fpattyn bcondon
  • Protein networks in disease
    Genome Res., Vol. 18, No. 4. (1 April 2008), pp. 644-652.
    by Trey Ideker, Roded Sharan
    posted to networks informatics immunity genome-transcriptome genome-interactome evolutionary-proteomics diseaseomics by balicea on 2008-06-19 16:38:28 as ** along with 19 people zwang raiyar ptrobajo jfr brianb paolomarcatili thomaskelder gracio schuylrp jyuh tmmurali Borelli jwdietrich frohike bootsy nedwards roys mclarenv phoenixzxl
  • Update on the molecular diagnosis of endocrine tumors: toward -omics-based personalized healthcare?
    The Journal of clinical endocrinology and metabolism, Vol. 93, No. 4. (April 2008), pp. 1097-1104.
    by F Weber, C Eng
    posted to neuro-rehabilitation molecular-signaling molecular-general informatics diseaseomics by balicea on 2008-06-19 16:29:53 as ** along with 1 person raiyar
  • Detecting recent positive selection in the human genome from haplotype structure
    Nature, Vol. 419, No. 6909. (24 October 2002), pp. 832-837.
    by Pardis C Sabeti, David E Reich, John M Higgins, Haninah Z Levine, Daniel J Richter, Stephen F Schaffner, Stacey B Gabriel, Jill V Platko, Nick J Patterson, Gavin J Mcdonald, Hans C Ackerman, Sarah J Campbell, David Altshuler, Richard Cooper, Dominic Kwiatkowski, Ryk Ward, Eric S Lander
    posted to nat-selection-tests informatics genome-structure genome-prediction evolutionary-genomics evolution by balicea on 2008-06-17 03:18:55 as ** along with 5 people and 1 group jasonflannick brant ausiddiqui hdopazo djkt BioinfoCIPF
  • The biological principles of swarm intelligence
    Swarm Intelligence, Vol. 1, No. 1. (18 June 2007), pp. 3-31.
    by Simon Garnier, Jacques Gautrais, Guy Theraulaz
    posted to time-dynamics systems-biology modeling-and-simulation informatics cultural-evolution complexity applied-math animal-model alife adaptive-systems by balicea on 2008-06-16 04:07:11 as ** along with 4 people and 1 group nojhan sviscido cwr SimonGarnier Social Aggregation
  • The Design and Analysis of Spatial Data Structures (Addison-Wesley series in computer science)
    by Hanan Samet
    posted to spatial-cognition neuro-computation informatics evo-computation bio-stat applied-math by balicea on 2008-06-16 03:33:52 as ** along with 1 person burtonwu
  • Disease Gene Explorer: Display Disease Gene Dependency by Combining Bayesian Networks with Clustering
    (2004), pp. 574-575.
    by Qian Diao, We Hu, Hao Zhong, Juntao Li, Feng Xue, Tao Wang, Yimin Zhang
    posted to systems-biology informatics genome-structure evolutionary-genomics diseaseomics bio-stat applied-math by balicea on 2008-06-16 03:29:47 as ** along with 1 person and 2 groups mattjb DSTO-CAS ComplexAdaptiveSystems
  • Predicting failure rate of PCR in large genomes
    Nucl. Acids Res. (20 May 2008), gkn290.
    by Reidar Andreson, Tonu Mols, Maido Remm
    posted to systems-biology methods informatics genome-sequencing genome-prediction functional-genome by balicea on 2008-06-15 04:36:47 as ** along with 2 people niallhaslam wisdom_love
  • Computational discovery of gene modules and regulatory networks.
    Nat Biotechnol, Vol. 21, No. 11. (November 2003), pp. 1337-1342.
    by Z Bar-Joseph, GK Gerber, TI Lee, NJ Rinaldi, JY Yoo, F Robert, DB Gordon, E Fraenkel, TS Jaakkola, RA Young, DK Gifford
    posted to regulatory-cascades networks informatics by balicea on 2008-06-10 19:26:24 as ** along with 12 people and 1 group dquest carlk tvdbulck ggrot dragonrez bayesian wnpx nickluscombe koller frohike karfunkel roys EBI-regulation
  • Discovery of Gene Function by Expression Profiling of the Malaria Parasite Life Cycle
    Science, Vol. 301, No. 5639. (12 September 2003), pp. 1503-1508.
    by Karine G Le Roch, Yingyao Zhou, Peter L Blair, Muni Grainger, Kathleen J Moch, David J Haynes, De La, Anthony A Holder, Serge Batalov, Daniel J Carucci, Elizabeth A Winzeler
    posted to molecular-signaling informatics gene-expression development animal-model by balicea on 2008-06-09 02:18:10 as ** along with 3 people shuzhens Sharpshoot GeeSharpMinor
  • SNPbox: web-based high-throughput primer design from gene to genome.
    Nucleic Acids Res, Vol. 32, No. Web Server issue. (1 July 2004)
    by S Weckx, P De Rijk, C Van Broeckhoven, J Del-Favero
    posted to systems-biology informatics genome-variation by balicea on 2008-06-06 03:37:30 as ** along with 2 people sebastien_vigneau jyuh
  • NeAT: a toolbox for the analysis of biological networks, clusters, classes and pathways
    Nucl. Acids Res. (4 June 2008), gkn336.
    by Sylvain Brohee, Karoline Faust, Gipsi Lima-Mendez, Olivier Sand, Rekin's Janky, Gilles Vanderstocken, Yves Deville, Jacques van Helden
    posted to systems-biology networks informatics by balicea on 2008-06-05 05:30:48 as ** along with 2 people brianb neils
  • Large scale genotype-phenotype correlation analysis based on phylogenetic trees.
    Bioinformatics (31 January 2007)
    by Farhat Habib, Andrew D D Johnson, Ralf Bundschuh, Daniel Janies
    posted to phylogeny informatics genotype-to-phenotype bio-stat applied-math by balicea on 2008-06-02 17:43:21 as ** along with 3 people smbe2008 djkt shigepong
  • Predicting essential genes in fungal genomes
    Genome Res., Vol. 16, No. 9. (1 September 2006), pp. 1126-1135.
    by Michael Seringhaus, Alberto Paccanaro, Anthony Borneman, Michael Snyder, Mark Gerstein
    posted to informatics genome-prediction bio-stat animal-model by balicea on 2008-06-01 07:11:54 as ** along with 4 people saket olympos GustavoLacerda dbenn
  • Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments
    Nucl. Acids Res. (31 May 2008), gkn318.
    by Fatima Al-Shahrour, Jose Carbonell, Pablo Minguez, Stefan Goetz, Ana Conesa, Joaquin Tarraga, Ignacio Medina, Eva Alloza, David Montaner, Joaquin Dopazo
    posted to informatics genome-transcriptome genome-interactome functional-genome evolutionary-proteomics evolutionary-genomics bio-stat by balicea on 2008-06-01 07:06:40 as ** along with 2 people sgoetz neils
  • Estimating the size of the human interactome
    Proceedings of the National Academy of Sciences (12 May 2008), 0708078105.
    by Michael P Stumpf, Thomas Thorne, Eric de Silva, Ronald Stewart, Hyeong J An, Michael Lappe, Carsten Wiuf
    posted to systems-biology informatics genome-interactome gene-gene bio-stat applied-math by balicea on 2008-06-01 06:55:29 as *** along with 18 people chad_davis Evangelia marck paolomarcatili sanchezbuelna cabbagesofdoom xingxu mjoach jyuh chrissp100 zwang roys brianb friendpine Ema neils tmmurali phoenixzxl
  • Phenome connections
    Trends in Genetics, Vol. 24, No. 3. (March 2008), pp. 103-106.
    by Martin Oti, Martijn A Huynen, Han G Brunner
    posted to reviews informatics genotype-to-phenotype diseaseomics by balicea on 2008-05-06 16:57:20 as *** along with 2 people and 1 group jyuh aubinhon Integrative_biology_behavior
  • De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer.
    Genome Res (10 March 2008)
    by David Hernandez, Patrice Francois, Laurent Farinelli, Magne Osteras, Jacques Schrenzel
    posted to neuro-tech informatics genome-variation genome-sequencing evo-tech by balicea on 2008-05-01 21:08:23 as *** along with 6 people and 3 groups Neeperando jmeppley stajich azazello Katje iris42 microbiology_nijmegen Berkeley Mycology gatech-compgenomics
  • Primer: genomic and proteomic tools for the molecular dissection of disease.
    Nat Clin Pract Rheumatol, Vol. 3, No. 10. (October 2007), pp. 580-589.
    by EJ Walker, KA Siminovitch
    posted to diseaseomics evolutionary-genomics evolutionary-proteomics informatics methods modeling-and-simulation reviews by balicea on 2008-02-22 05:26:15 as *** along with 1 person jyuh
  • Genes Related with Alzheimer’s Disease: A Comparison of Evolutionary Search, Statistical and Integer Programming Approaches
    Applications on Evolutionary Computing (2005), pp. 84-94.
    by Pablo Moscato, Regina Berretta, Mou’ath Hourani, Alexandre Mendes, Carlos Cotta
    posted to diseaseomics evo-computation genome-association informatics modeling-and-simulation by balicea on 2008-02-18 02:29:28 as ** along with 1 person minostro
  • Measuring and extracting proximity in networks
    (2006), pp. 245-255.
    by Yehuda Koren, Stephen C North, Chris Volinsky
    posted to complexity graph-theory informatics networks by balicea on 2008-01-29 15:52:57 as *** along with 2 people xiaoyan2006 RafG
  • The Human Connectome: A Structural Description of the Human Brain
    PLoS Computational Biology, Vol. 1, No. 4. (1 September 2005), e42.
    by Olaf Sporns, Giulio Tononi, Rolf Kötter
    posted to brain-anatomy general-physiology genome-interactome informatics neuro-connectivity neuro-tech systems-biology by balicea on 2008-01-25 05:43:26 as *** along with 4 people and 1 group bandrewfox dolhuis josepe suizan SNE
  • High-confidence prediction of global interactomes based on genome-wide coevolutionary networks
    Proceedings of the National Academy of Sciences (16 January 2008), 0709671105.
    by David Juan, Florencio Pazos, Alfonso Valencia
    posted to coevolution evolutionary-genomics genome-interactome informatics networks systems-biology whole-genomic by balicea on 2008-01-22 19:41:32 as *** along with 12 people and 1 group paolomarcatili tmmurali brant sebastien_vigneau bluto cjeans aconesa Katje roys friendpine huali mdstobbe microbiology_nijmegen
  • Extensive low-affinity transcriptional interactions in the yeast genome.
    Genome Res (29 June 2006)
    by Amos Tanay
    posted to animal-model evo-computation evolutionary-proteomics gene-expression gene-gene genome-association genome-sequencing genome-structure genome-variation genotype-to-phenotype informatics systems-biology by balicea on 2008-01-22 00:21:45 as *** along with 6 people and 1 group devin indigoviolet dpollard koller lusk emptyhb EisenLab
  • Vienna RNA secondary structure server.
    Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3429-3431.
    by IL Hofacker
    posted to evolutionary-proteomics informatics machine-learning systems-biology by balicea on 2008-01-22 00:15:05 as *** along with 10 people reyez evaf dayjm eckart_bindewald arcticrasta mtagaya dquest ilh onufriev maralena
  • Combining docking, scoring and molecular field analyses to probe influenza neuraminidase-ligand interactions.
    J Mol Graph Model, Vol. 26, No. 2. (September 2007), pp. 443-456.
    by AM Abu Hammad, FU Afifi, MO Taha
    posted to biological-mechanics cell-models diseaseomics evolutionary-proteomics gene-gene informatics modeling-and-simulation systems-biology by balicea on 2008-01-21 20:01:52 as *** along with 1 person apostola
  • Practical Strategies for Discovering Regulatory DNA Sequence Motifs
    PLoS Computational Biology, Vol. 2, No. 4. (1 April 2006), e36.
    by Kenzie D Macisaac, Ernest Fraenkel
    posted to evolutionary-genomics genome-sequencing genome-structure genome-variation genotype-to-phenotype growth-regulation homeotic-theory informatics systems-biology by balicea on 2008-01-21 19:51:16 as *** along with 6 people and 2 groups kristallreiner ana chad_davis hggr GustavoLacerda svdate structural_bioinformatics Bioinformatics
  • The Many Roles of Computation in Drug Discovery
    Science, Vol. 303, No. 5665. (19 March 2004), pp. 1813-1818.
    by William L Jorgensen
    posted to diseaseomics informatics methods modeling-and-simulation reviews systems-biology by balicea on 2008-01-21 03:57:54 as *** along with 8 people dgruiz kuhn blackbart ramensky euan junehlee onufriev ashaytan
  • Alternative splicing: a bioinformatics perspective.
    Mol Biosyst, Vol. 3, No. 7. (July 2007), pp. 473-477.
    by EN Ferreira, PA Galante, DM Carraro, SJ de Souza
    posted to evolutionary-genomics evolutionary-proteomics general-physiology genome-splicings genome-structure informatics molecular-signaling neuro-genetics by balicea on 2008-01-18 17:57:11 as *** along with 2 people alexl seitentaisei
  • Human protein atlas and the use of microarray technologies.
    Curr Opin Biotechnol (8 January 2008)
    by S Hober, M Uhlén
    posted to diseaseomics evolutionary-proteomics gene-expression informatics microarray by balicea on 2008-01-18 03:58:53 as *** along with 1 person jyuh
  • Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package annotationTools
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Alexandre Kuhn, Ruth L Carter, Mauro Delorenzi
    posted to animal-model gene-expression genome-variation informatics methods reviews by balicea on 2008-01-17 17:04:54 as *** along with 9 people bertelsen ablejec zhouyu jyuh jfr dullhunk ghattem RamuAnandakrishnan heliopais
  • ARACHNE: A Whole-Genome Shotgun Assembler
    Genome Res., Vol. 12, No. 1. (1 January 2002), pp. 177-189.
    by Serafim Batzoglou, David B Jaffe, Ken Stanley, Jonathan Butler, Sante Gnerre, Evan Mauceli, Bonnie Berger, Jill P Mesirov, Eric S Lander
    posted to genome-sequencing informatics whole-genomic by balicea on 2008-01-16 03:21:54 as *** along with 10 people and 3 groups pradiptaray Neeperando bpb dayjm balajis indigoviolet ccr azazello wenhan tpreeprem EisenLab MBLAB gatech-compgenomics
  • Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling.
    Cell, Vol. 125, No. 1. (7 April 2006), pp. 173-186.
    by T Kislinger, B Cox, A Kannan, C Chung, P Hu, A Ignatchenko, MS Scott, AO Gramolini, Q Morris, MT Hallett, J Rossant, TR Hughes, B Frey, A Emili
    posted to animal-model evolutionary-proteomics evo-tech gene-expression informatics systems-biology by balicea on 2008-01-14 19:13:25 as *** along with 1 person kristen
  • AGEMAP: A Gene Expression Database for Aging in Mice
    PLoS Genetics, Vol. 3, No. 11. (1 November 2007), e201.
    by Jacob M Zahn, Suresh Poosala, Art B Owen, Donald K Ingram, Ana Lustig, Arnell Carter, Ashani T Weeraratna, Dennis D Taub, Myriam Gorospe, Krystyna Mazan-Mamczarz, Edward G Lakatta, Kenneth R Boheler, Xiangru Xu, Mark P Mattson, Geppino Falco, Minoru S Ko, David Schlessinger, Jeffrey Firman, Sarah K Kummerfeld, William H Wood, Alan B Zonderman, Stuart K Kim, Kevin G Becker
    posted to animal-model development gene-expression informatics systems-biology by balicea on 2008-01-14 19:12:05 as *** along with 3 people tmmurali johncumbers kristen
  • STITCH: interaction networks of chemicals and proteins.
    Nucleic Acids Res (15 December 2007)
    by Michael Kuhn, Christian von Mering, Monica Campillos, Lars Juhl J Jensen, Peer Bork
    posted to evolutionary-proteomics informatics networks systems-biology by balicea on 2008-01-13 20:10:34 as *** along with 6 people and 1 group higueruelo jyuh massivemayhem bootsy sobolevnrm larsjuhljensen baker-group
  • Density Dependence Triggers Runaway Selection of Reduced Senescence
    PLoS Computational Biology, Vol. 3, No. 12. (1 December 2007), e256.
    by Robert M Seymour, Patrick C Doncaster
    posted to complexity development diseaseomics general-physiology genome-structure genome-variation growth-regulation informatics by balicea on 2008-01-11 19:21:24 as *** along with 1 person kristen
  • A forest-based approach to identifying gene and gene gene interactions
    Proceedings of the National Academy of Sciences (28 November 2007), 0709868104.
    by Xiang Chen, Ching-Ti Liu, Meizhuo Zhang, Heping Zhang
    posted to gene-gene genome-structure informatics systems-biology by balicea on 2008-01-11 19:14:18 as *** along with 5 people jyuh cjeans zwang xingxu hpaces
  • A highly sensitive and specific system for large-scale gene expression profiling
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Guohong Hu, Qifeng Yang, Xiangfeng Cui, Gang Yue, Marco Azaro, Hui Y Wang, Honghua Li
    posted to evolutionary-genomics gene-expression general-physiology genome-variation informatics modeling-and-simulation systems-biology whole-genomic by balicea on 2008-01-11 04:56:04 as *** along with 2 people jyuh GeeSharpMinor
  • DAISY: a new software tool to test global identifiability of biological and physiological systems.
    Comput Methods Programs Biomed, Vol. 88, No. 1. (October 2007), pp. 52-61.
    by G Bellu, MP Saccomani, S Audoly, L D'Angiò
    posted to general-physiology informatics reviews systems-biology by balicea on 2008-01-11 04:54:10 as *** along with 1 person jyuh
  • Computational approaches to identify promoters and cis-regulatory elements in plant genomes.
    Plant Physiol, Vol. 132, No. 3. (July 2003), pp. 1162-1176.
    by S Rombauts, K Florquin, M Lescot, K Marchal, P Rouzé, Y van de Peer
    posted to evo-computation gene-expression genome-structure homeotic-theory informatics regulatory-cascades systems-biology by balicea on 2008-01-10 04:39:30 as *** along with 2 people saru xili03
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