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bethbromleys library [72 articles]

Nye artikler sendt til bethbromleys bibliotek.
  • Design of a minimal protein oligomerization domain by a structural approach.
    Protein science : a publication of the Protein Society, Vol. 9, No. 12. (December 2000), pp. 2294-2301.
    by P Burkhard, M Meier, A Lustig
    posted to burkhard2000 by bethbromley on 2008-04-07 12:17:36 as **
  • Helix capping propensities in peptides parallel those in proteins.
    Proc Natl Acad Sci U S A, Vol. 90, No. 23. (1 December 1993), pp. 11332-11336.
    by A Chakrabartty, AJ Doig, RL Baldwin
    posted to chakrabartty1993 by bethbromley on 2008-04-07 10:30:37 as ** along with 1 person fjc1
  • A Consensus Zinc Finger Peptide: Design, High-Affinity Metal Binding, a pH-Dependent Structure, and a His to Cys Sequence Variant
    Journal of the American Chemical Society, Vol. 113, pp. 4518-4523.
    by Beth A Krizek, Barbara T Amann, Valda J Kilfoil, Denise L Merkle, Jeremy M Berg
    posted to krizek1991 by bethbromley on 2008-03-18 15:11:16 as **
  • Metal binding and folding properties of a minimalist Cys2His2 zinc finger peptide
    Proceedings of the National Academy of Science USA, Vol. 89 (1991), pp. 4796-4800.
    by Scott F Michael, Valda J Kilfoil, Michael H Schmidt, Barbara T Amann, Jeremy M Berg
    posted to michael1991 by bethbromley on 2008-03-18 12:50:57 as **
  • Analysis of covariation in an SH3 domain sequence alignment: applications in tertiary contact prediction and the design of compensating hydrophobic core substitutions.
    J Mol Biol, Vol. 303, No. 3. (27 October 2000), pp. 433-446.
    by SM Larson, AA Di Nardo, AR Davidson
    posted to larson2000 by bethbromley on 2008-03-18 11:02:35 as ** along with 6 people and 2 groups ana gbart analogAI Haggan cjeans tale structural_bioinformatics Bioinformatics
  • Evolutionarily Conserved Pathways of Energetic Connectivity in Protein Families
    Science, Vol. 286, No. 5438. (08 October 1999), pp. 295-299.
    by Steve W Lockless, Rama Ranganathan
    posted to lockless1999 by bethbromley on 2008-03-18 10:55:49 as ** along with 15 people and 5 groups stevanspringer Einat marcius eckart_bindewald analogAI dgront caporaso sriram_s choonpeng Haggan rabio mottonen zambujo mingzhi ca3295 structural_bioinformatics FAB-lab biomedical-nlp BioinfoCIPF SGU-CIPF
  • Natural-like function in artificial WW domains
    Nature, Vol. 437, No. 7058., pp. 579-583.
    by William P Russ, Drew M Lowery, Prashant Mishra, Michael B Yaffe, Rama Ranganathan
    posted to russ2005 by bethbromley on 2008-03-18 10:43:44 as ** along with 6 people and 5 groups ana barry balajis marcius caporaso ca3295 structural_bioinformatics Bioinformatics biomedical-nlp BioinfoCIPF SGU-CIPF
  • Evolutionary information for specifying a protein fold
    Nature, Vol. 437, No. 7058., pp. 512-518.
    by Michael Socolich, Steve W Lockless, William P Russ, Heather Lee, Kevin H Gardner, Rama Ranganathan
    posted to socolich2005 by bethbromley on 2008-03-18 10:43:23 as ** along with 14 people and 5 groups ana barry lna bpb Einat balajis marcius gbart analogAI nirfriedman caporaso massivemayhem mingzhi ca3295 structural_bioinformatics Bioinformatics biomedical-nlp BioinfoCIPF SGU-CIPF
  • Knowledge-based potentials in protein design
    Current Opinion in Structural Biology, Vol. 16, No. 4. (August 2006), pp. 508-513.
    by Alan M Poole, Rama Ranganathan
    posted to poole2006 by bethbromley on 2008-03-18 10:29:01 as ** along with 3 people and 2 groups nigham marcius rabio BioinfoCIPF SGU-CIPF
  • Functionalized oligoanthranilamides: modular and conformationally controlled scaffolds.
    Bioorg Med Chem, Vol. 9, No. 9. (September 2001), pp. 2355-2363.
    by Y Hamuro, AD Hamilton
    posted to hamuro2001 by bethbromley on 2008-03-17 17:41:18 as **
  • Proteomorphous objects from abiotic backbones.
    Angew Chem Int Ed Engl, Vol. 46, No. 1-2. (2007), pp. 214-217.
    by N Delsuc, JM Léger, S Massip, I Huc
    posted to delsuc2007 by bethbromley on 2008-03-17 17:39:14 as **
  • Interconversion of single and double helices formed from synthetic molecular strands.
    Nature, Vol. 407, No. 6805. (12 October 2000), pp. 720-723.
    by V Berl, I Huc, RG Khoury, MJ Krische, JM Lehn
    posted to berl2000 by bethbromley on 2008-03-17 17:33:53 as **
  • Naphthyridine-Based Helical Foldamers and Macrocycles: Synthesis, Cation Binding, and Supramolecular Assemblies.
    J Org Chem (4 March 2008)
    by Anne Petitjean, Louis A Cuccia, Marc Schmutz, Jean-Marie M Lehn
    posted to petitjean2008 by bethbromley on 2008-03-17 17:21:16 as **
  • Benzoylurea oligomers: synthetic foldamers that mimic extended alpha helices.
    Angew Chem Int Ed Engl, Vol. 46, No. 45. (2007), pp. 8614-8617.
    by JM Rodriguez, AD Hamilton
    posted to rodriguez2007 by bethbromley on 2008-03-17 17:15:15 as **
  • Discrete heterogeneous quaternary structure formed by alpha/beta-peptide foldamers and alpha-peptides.
    J Am Chem Soc, Vol. 129, No. 20. (23 May 2007), pp. 6376-6377.
    by JL Price, WS Horne, SH Gellman
    posted to price2007 by bethbromley on 2008-03-17 15:38:35 as **
  • Nanofibers and lyotropic liquid crystals from a class of self-assembling beta-peptides.
    Angew Chem Int Ed Engl, Vol. 47, No. 7. (2008), pp. 1241-1244.
    by WC Pomerantz, VM Yuwono, CL Pizzey, JD Hartgerink, NL Abbott, SH Gellman
    posted to pomerantz2008 by bethbromley on 2008-03-17 15:32:13 as ** along with 1 person kevinchannon
  • Engineering nanoscale order into a designed protein fiber.
    Proc Natl Acad Sci U S A, Vol. 104, No. 26. (26 June 2007), pp. 10853-10858.
    by D Papapostolou, AM Smith, ED Atkins, SJ Oliver, MG Ryadnov, LC Serpell, DN Woolfson
    posted to papapostolou2007 by bethbromley on 2008-03-17 12:57:32 as ** along with 1 person and 1 group jmrivort Supramolecular
  • Semirational design of Jun-Fos coiled coils with increased affinity: Universal implications for leucine zipper prediction and design.
    Proc Natl Acad Sci U S A, Vol. 103, No. 24. (13 June 2006), pp. 8989-8994.
    by JM Mason, MA Schmitz, KM Müller, KM Arndt
    posted to mason2006 by bethbromley on 2008-03-14 16:26:42 as ** along with 3 people ca3295 gwenknight chgjb
  • Self-Assembly of Proteins into Designed Networks
    Science, Vol. 302, No. 5642. (3 October 2003), pp. 106-109.
    by Philippe Ringler, Georg E Schulz
    posted to ringler2003 by bethbromley on 2008-03-14 15:46:35 as ** along with 1 person dna
  • Self-Assembly of a Tetrahedral Lectin into Predesigned Diamondlike Protein Crystals.
    Angew Chem Int Ed Engl, Vol. 38, No. 16. (August 1999), pp. 2363-2366.
    by N Dotan, D Arad, F Frolow, A Freeman
    posted to dotan1999 by bethbromley on 2008-03-14 15:45:04 as **
  • Nanohedra: using symmetry to design self assembling protein cages, layers, crystals, and filaments.
    Proc Natl Acad Sci U S A, Vol. 98, No. 5. (27 February 2001), pp. 2217-2221.
    by JE Padilla, C Colovos, TO Yeates
    posted to padilla2001 by bethbromley on 2008-03-14 15:39:32 as ** along with 1 person and 2 groups jwm Radiation_Damage Stressosome
  • Yeast two-hybrid contributions to interactome mapping
    Current Opinion in Biotechnology, Vol. 17, No. 4. (August 2006), pp. 387-393.
    by Jodi R Parrish, Keith D Gulyas, Jr Finley
    posted to parrish2006 by bethbromley on 2008-03-14 15:37:05 as ** along with 6 people and 2 groups maryee dchughes eukfn nm grahamc cmor G4ID Genetics-of-Gambling
  • Design of three-dimensional domain-swapped dimers and fibrous oligomers.
    Proc Natl Acad Sci U S A, Vol. 98, No. 4. (13 February 2001), pp. 1404-1409.
    by NL Ogihara, G Ghirlanda, JW Bryson, M Gingery, WF DeGrado, D Eisenberg
    posted to ogihara2001 by bethbromley on 2008-03-14 15:35:42 as **
  • The green fluorescent protein.
    Annu Rev Biochem, Vol. 67 (1998), pp. 509-544.
    by RY Tsien
    posted to tsien1998 by bethbromley on 2008-03-14 15:33:07 as ** along with 4 people and 1 group kieran101 austin dark_innocent eeruowl neurolit
  • De Novo Design of Strand-Swapped beta-Hairpin Hydrogels.
    J Am Chem Soc (12 March 2008)
    by Radhika P Nagarkar, Rohan A Hule, Darrin J Pochan, Joel P Schneider
    posted to nagarkar2008 by bethbromley on 2008-03-14 15:19:21 as ** along with 1 person kevinchannon
  • Fiber recruiting peptides: noncovalent decoration of an engineered protein scaffold.
    J Am Chem Soc, Vol. 126, No. 24. (23 June 2004), pp. 7454-7455.
    by MG Ryadnov, DN Woolfson
    posted to ryadnov2004 by bethbromley on 2008-03-14 15:09:25 as **
  • MaP peptides: programming the self-assembly of peptide-based mesoscopic matrices.
    J Am Chem Soc, Vol. 127, No. 35. (7 September 2005), pp. 12407-12415.
    by MG Ryadnov, DN Woolfson
    posted to ryadnov2005 by bethbromley on 2008-03-14 15:08:08 as **
  • Polar Assembly in a Designed Protein Fiber
    Angewandte Chemie International Edition, Vol. 44, No. 2. (2005), pp. 325-328.
    by Andrew M Smith, Steve FA Acquah, Neil Bone, Harold W Kroto, Maxim G Ryadnov, Marryat SP Stevens, David RM Walton, Derek N Woolfson
    posted to smith2004 by bethbromley on 2008-03-14 15:07:28 as ** along with 1 person pjkiley
  • Uniquely folded mini-protein motifs.
    J Pept Res, Vol. 54, No. 3. (September 1999), pp. 177-184.
    by B Imperiali, JJ Ottesen
    posted to no-tag by bethbromley on 2008-02-19 15:18:19 as **
  • DNA-bending finger: artificial design of 6-zinc finger peptides with polyglycine linker and induction of DNA bending.
    Biochemistry, Vol. 39, No. 15. (18 April 2000), pp. 4383-4390.
    by M Imanishi, Y Hori, M Nagaoka, Y Sugiura
    posted to no-tag by bethbromley on 2008-02-19 15:16:19 as **
  • Conversion of antennapedia homeodomain to zinc finger-like domain: Zn(II)-induced change in protein conformation and DNA binding.
    J Am Chem Soc, Vol. 124, No. 32. (14 August 2002), pp. 9362-9363.
    by Y Hori, Y Sugiura
    posted to no-tag by bethbromley on 2008-02-19 15:15:39 as **
  • The engineering, structure, and DNA binding properties of a novel His4-type zinc finger peptide.
    Nucleic Acids Symp Ser, No. 44. (2000), pp. 295-296.
    by Y Hori, K Suzuki, Y Okuno, M Nagaoka, S Futaki, Y Sugiura
    posted to no-tag by bethbromley on 2008-02-19 15:14:40 as **
  • Effects of Zn(II) binding and apoprotein structural stability on the conformation change of designed antennafinger proteins.
    Biochemistry, Vol. 43, No. 11. (23 March 2004), pp. 3068-3074.
    by Y Hori, Y Sugiura
    posted to no-tag by bethbromley on 2008-02-19 15:13:24 as **
  • The design of coiled-coil structures and assemblies.
    Adv Protein Chem, Vol. 70 (2005), pp. 79-112.
    by DN Woolfson
    posted to no-tag by bethbromley on 2008-02-19 15:11:01 as ** along with 2 people ca3295 gbartbristol
  • Investigating the tolerance of coiled-coil peptides to nonheptad sequence inserts.
    J Struct Biol, Vol. 137, No. 1-2. (b 2002), pp. 73-81.
    by MR Hicks, J Walshaw, DN Woolfson
    posted to no-tag by bethbromley on 2008-02-19 15:09:05 as **
  • Automated design of specificity in molecular recognition.
    Nat Struct Biol, Vol. 10, No. 1. (January 2003), pp. 45-52.
    by JJ Havranek, PB Harbury
    posted to no-tag by bethbromley on 2008-02-19 15:07:32 as ** along with 1 person phoenixzxl
  • Repacking protein cores with backbone freedom: structure prediction for coiled coils.
    Proc Natl Acad Sci U S A, Vol. 92, No. 18. (29 August 1995), pp. 8408-8412.
    by PB Harbury, B Tidor, PS Kim
    posted to no-tag by bethbromley on 2008-02-19 15:06:30 as **
  • Crystal structure of an isoleucine-zipper trimer.
    Nature, Vol. 371, No. 6492. (1 September 1994), pp. 80-83.
    by PB Harbury, PS Kim, T Alber
    posted to no-tag by bethbromley on 2008-02-19 15:06:16 as **
  • A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants.
    Science, Vol. 262, No. 5138. (26 November 1993), pp. 1401-1407.
    by PB Harbury, T Zhang, PS Kim, T Alber
    posted to no-tag by bethbromley on 2008-02-19 15:06:02 as ** along with 2 people ca3295 gwenknight
  • Combinations of turns in proteins.
    J Pept Res, Vol. 62, No. 4. (October 2003), pp. 167-174.
    by K Guruprasad, MJ Rao, S Adindla, L Guruprasad
    posted to no-tag by bethbromley on 2008-02-19 15:04:24 as **
  • Characteristic features of amino acid residues in coiled-coil protein structures.
    Biophys Chem, Vol. 111, No. 2. (1 October 2004), pp. 95-103.
    by MM Gromiha, DA Parry
    posted to no-tag by bethbromley on 2008-02-19 15:01:32 as **
  • The Alacoil: a very tight, antiparallel coiled-coil of helices.
    Protein Sci, Vol. 4, No. 11. (November 1995), pp. 2252-2260.
    by KM Gernert, MC Surles, TH Labean, JS Richardson, DC Richardson
    posted to no-tag by bethbromley on 2008-02-19 14:59:28 as **
  • Rapid Chiral Assembly of Rigid DNA Building Blocks for Molecular Nanofabrication
    Science, Vol. 310, No. 5754. (9 December 2005), pp. 1661-1665.
    by RP Goodman, IAT Schaap, CF Tardin, CM Erben, RM Berry, CF Schmidt, AJ Turberfield
    posted to no-tag by bethbromley on 2008-02-19 14:57:24 as ** along with 6 people dayjm eckart_bindewald stsaft rodney phisics Kiarostami
  • Single-molecule protein encapsulation in a rigid DNA cage.
    Angew Chem Int Ed Engl, Vol. 45, No. 44. (13 November 2006), pp. 7414-7417.
    by CM Erben, RP Goodman, AJ Turberfield
    posted to no-tag by bethbromley on 2008-02-19 14:56:54 as **
  • A self-assembled DNA bipyramid.
    J Am Chem Soc, Vol. 129, No. 22. (6 June 2007), pp. 6992-6993.
    by CM Erben, RP Goodman, AJ Turberfield
    posted to no-tag by bethbromley on 2008-02-19 14:56:28 as **
  • Short homodimeric and heterodimeric coiled coils.
    Biomacromolecules, Vol. 7, No. 3. (March 2006), pp. 691-695.
    by H Dong, JD Hartgerink
    posted to no-tag by bethbromley on 2008-02-19 14:55:23 as read
  • N- and C-capping preferences for all 20 amino acids in alpha-helical peptides.
    Protein Sci, Vol. 4, No. 7. (July 1995), pp. 1325-1336.
    by AJ Doig, RL Baldwin
    posted to no-tag by bethbromley on 2008-02-19 14:53:08 as read along with 1 person ca3295
  • Doughnut-shaped peptide nano-assemblies and their applications as nanoreactors.
    J Am Chem Soc, Vol. 126, No. 25. (30 June 2004), pp. 7935-7939.
    by R Djalali, J Samson, H Matsui
    posted to no-tag by bethbromley on 2008-02-19 14:49:54 as read
  • ATP synthase b subunit dimerization domain: a right-handed coiled coil with offset helices.
    J Mol Biol, Vol. 364, No. 4. (8 December 2006), pp. 735-746.
    by PA Del Rizzo, Y Bi, SD Dunn
    posted to no-tag by bethbromley on 2008-02-19 14:48:29 as read
  • A large scale test of computational protein design: folding and stability of nine completely redesigned globular proteins.
    J Mol Biol, Vol. 332, No. 2. (12 September 2003), pp. 449-460.
    by G Dantas, B Kuhlman, D Callender, M Wong, D Baker
    posted to no-tag by bethbromley on 2008-02-19 14:47:19 as ** along with 2 people jwm leelarcombe
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