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bjorns' library [271 articles]

Nye artikler sendt til bjorns' bibliotek.
  • Visualization of pseudogenes in intracellular bacteria reveals the different tracks to gene destruction
    Genome Biology, Vol. 9 (26 February 2008), R42.
    by Hans-Henrik Fuxelius, Alistair C Darby, Nam-Huyk Cho, Siv GE Andersson
    posted to molev by bjorns on 2008-09-01 12:00:23 as ** along with 1 person operon
  • Adhesion mediated by autotransporters of Gram-negative bacteria: Structural and functional features
    Research in Microbiology, Vol. 157, No. 5. (June 2006), pp. 407-416.
    by Victoria Girard, Michael Mourez
    posted to autotransporter review by bjorns on 2008-03-18 13:35:32 as **
  • Protein Secretion in Gram-Negative Bacteria via the Autotransporter Pathway
    Annual Review of Microbiology, Vol. 61, No. 1. (2007), pp. 89-112.
    by Nathalie Dautin, Harris D Bernstein
    posted to autotransporter by bjorns on 2008-03-18 13:32:27 as **
  • Characterization of an Immunogenic Outer Membrane Autotransporter Protein, Arp, of Bartonella henselae
    Infect. Immun., Vol. 75, No. 11. (1 November 2007), pp. 5255-5263.
    by Christine M Litwin, Mindy L Rawlins, Erica M Swenson
    posted to autotransporter by bjorns on 2008-03-18 13:27:37 as **
  • Gene conversion and concerted evolution in bacterial genomes.
    FEMS Microbiol Rev, Vol. 29, No. 2. (April 2005), pp. 169-183.
    by G Santoyo, D Romero
    posted to geneconversion by bjorns on 2007-07-18 11:54:32 as **
  • Role of Agrobacterium VirB11 ATPase in T-pilus assembly and substrate selection.
    J Bacteriol, Vol. 183, No. 20. (October 2001), pp. 5813-5825.
    by E Sagulenko, V Sagulenko, J Chen, PJ Christie
    posted to typeiv by bjorns on 2007-07-06 15:11:28 as **
  • Type III pilus of corynebacteria: Pilus length is determined by the level of its major pilin subunit.
    J Bacteriol, Vol. 188, No. 17. (September 2006), pp. 6318-6325.
    by A Swierczynski, H Ton-That
    posted to typeiii by bjorns on 2007-07-05 09:12:55 as ** along with 1 person srfairclough
  • Bacterial antigenic variation, host immune response, and pathogen-host coevolution.
    Infect Immun, Vol. 61, No. 6. (June 1993), pp. 2273-2276.
    by RC Brunham, FA Plummer, RS Stephens
    posted to recombination review surface by bjorns on 2007-06-29 10:54:18 as **
  • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.
    Genetics, Vol. 123, No. 3. (November 1989), pp. 585-595.
    by F Tajima
    posted to theory by bjorns on 2007-06-29 10:14:08 as ** along with 2 people bpb pradiptaray
  • Role of selection in fixation of gene duplications.
    J Theor Biol, Vol. 239, No. 2. (21 March 2006), pp. 141-151.
    by FA Kondrashov, AS Kondrashov
    posted to duplications by bjorns on 2007-06-29 08:33:41 as ** along with 2 people treangen bpcusack
  • Evolution after gene duplication: models, mechanisms, sequences, systems, and organisms.
    J Exp Zoolog B Mol Dev Evol (12 July 2006)
    by Christian Roth, Shruti Rastogi, Lars Arvestad, Katharina Dittmar, Sara Light, Diana Ekman, David A A Liberles
    posted to duplications by bjorns on 2007-06-29 08:21:57 as ** along with 6 people zhlei operon treangen signalduplication LouisKa smbe2008
  • Highly efficient concerted evolution in the ribosomal DNA repeats: total rDNA repeat variation revealed by whole-genome shotgun sequence data.
    Genome Res, Vol. 17, No. 2. (February 2007), pp. 184-191.
    by AR Ganley, T Kobayashi
    posted to geneconversion by bjorns on 2007-06-29 08:11:02 as ** along with 2 people dandaman dmc
  • Structure, function, and evolution of transient and obligate protein-protein interactions.
    Proc Natl Acad Sci U S A (25 July 2005)
    by Julian Mintseris, Zhiping Weng
    posted to networks rate by bjorns on 2007-06-28 16:18:14 as ** along with 9 people and 3 groups barry wiehe julianm bicko chad_davis cjeans Evangelia marti higueruelo structural_bioinformatics ZLAB Bioinformatics
  • Specificity in protein interactions and its relationship with sequence diversity and coevolution.
    Proc Natl Acad Sci U S A (27 April 2007)
    by Luke Hakes, Simon C C Lovell, Stephen G G Oliver, David L L Robertson
    posted to networks rate by bjorns on 2007-06-28 15:53:02 as ** along with 10 people and 2 groups marti stevanspringer cjeans zwang Garamonfok cursonivel1 tale winterschlaefer phoenixzxl chrys FAB-lab cursonivel1
  • Cutting edge: antibody-mediated cessation of hemotropic infection by the intraerythrocytic mouse pathogen Bartonella grahamii.
    J Immunol, Vol. 167, No. 1. (1 July 2001), pp. 11-14.
    by J Koesling, T Aebischer, C Falch, R Schülein, C Dehio
    posted to bartonella by bjorns on 2007-06-28 12:53:49 as **
  • A malaria invasion receptor, the 175-kilodalton erythrocyte binding antigen of Plasmodium falciparum recognizes the terminal Neu5Ac(alpha 2-3)Gal- sequences of glycophorin A.
    J Cell Biol, Vol. 116, No. 4. (February 1992), pp. 901-909.
    by PA Orlandi, FW Klotz, JD Haynes
    posted to erythrocytes by bjorns on 2007-06-28 11:26:04 as ** along with 1 person haiiroguma
  • System-wide genomic and biochemical comparisons of sialic acid biology among primates and rodents: Evidence for two modes of rapid evolution.
    J Biol Chem, Vol. 281, No. 35. (1 September 2006), pp. 25689-25702.
    by TK Altheide, T Hayakawa, TS Mikkelsen, S Diaz, N Varki, A Varki
    posted to erythrocytes by bjorns on 2007-06-28 10:10:13 as **
  • Transposition of structural genes to an expression sequence on a linear plasmid causes antigenic variation in the bacterium Borrelia hermsii.
    Nature, Vol. 318, No. 6043. (7 1985), pp. 257-263.
    by RH Plasterk, MI Simon, AG Barbour
    posted to geneconversion by bjorns on 2007-06-26 19:31:46 as **
  • Selection for more of the same product as a force to enhance concerted evolution of duplicated genes
    Trends in Genetics, Vol. 22, No. 12. (December 2006), pp. 642-644.
    by Ryuichi P Sugino, Hideki Innan
    posted to duplications by bjorns on 2007-06-26 16:50:19 as ** along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
  • The (in)dependence of alternative splicing and gene duplication.
    PLoS Comput Biol, Vol. 3, No. 3. (2 March 2007)
    by D Talavera, C Vogel, M Orozco, SA Teichmann, X de la Cruz
    posted to duplications by bjorns on 2007-06-26 16:46:23 as **
  • Antigen polymorphism in Borrelia hermsii, a clonal pathogenic bacterium.
    Proc Natl Acad Sci U S A, Vol. 98, No. 26. (18 December 2001), pp. 15038-15043.
    by SM Rich, SA Sawyer, AG Barbour
    posted to recombination by bjorns on 2007-06-18 10:14:52 as **
  • Effects of cow age and pregnancy on Bartonella infection in a herd of dairy cattle.
    J Clin Microbiol, Vol. 44, No. 1. (January 2006), pp. 42-46.
    by R Maillard, B Grimard, S Chastant-Maillard, B Chomel, T Delcroix, C Gandoin, C Bouillin, L Halos, M Vayssier-Taussat, HJ Boulouis
    posted to bovis by bjorns on 2007-06-07 10:13:27 as **
  • Bartonella bovis Bermond et al. sp. nov. and Bartonella capreoli sp. nov., isolated from European ruminants.
    Int J Syst Evol Microbiol, Vol. 52, No. Pt 2. (March 2002), pp. 383-390.
    by D Bermond, HJ Boulouis, R Heller, G Van Laere, H Monteil, BB Chomel, A Sander, C Dehio, Y Piémont
    posted to bovis by bjorns on 2007-06-07 10:09:04 as **
  • Type V Protein Secretion Pathway: the Autotransporter Story
    Microbiol. Mol. Biol. Rev., Vol. 68, No. 4. (1 December 2004), pp. 692-744.
    by Ian R Henderson, Fernando Navarro-Garcia, Mickael Desvaux, Rachel C Fernandez, Dlawer Ala'aldeen
    posted to typev by bjorns on 2007-06-07 10:01:22 as ** along with 2 people balajis pansapiens
  • Genome sequencing in microfabricated high-density picolitre reactors
    Nature (31 July 2005)
    by Marcel Margulies, Michael Egholm, William E Altman, Said Attiya, Joel S Bader, Lisa A Bemben, Jan Berka, Michael S Braverman, Yi-Ju Chen, Zhoutao Chen, Scott B Dewell, Lei Du, Joseph M Fierro, Xavier V Gomes, Brian C Godwin, Wen He, Scott Helgesen, Chun H Ho, Gerard P Irzyk, Szilveszter C Jando, Maria LI Alenquer, Thomas P Jarvie, Kshama B Jirage, Jong-Bum Kim, James R Knight, Janna R Lanza, John H Leamon, Steven M Lefkowitz, Ming Lei, Jing Li, Kenton L Lohman, Hong Lu, Vinod B Makhijani, Keith E Mcdade, Michael P Mckenna, Eugene W Myers, Elizabeth Nickerson, John R Nobile, Ramona Plant, Bernard P Puc, Michael T Ronan, George T Roth, Gary J Sarkis, Jan F Simons, John W Simpson, Maithreyan Srinivasan, Karrie R Tartaro, Alexander Tomasz, Kari A Vogt, Greg A Volkmer, Shally H Wang, Yong Wang, Michael P Weiner, Pengguang Yu, Richard F Begley, Jonathan M Rothberg
    posted to 454 by bjorns on 2007-06-07 09:57:51 as ** along with 23 people and 5 groups dayjm jmeppley arve RMGraze JAShapiro balajis cdawson AaronDarling treangen usagi-kirin azazello beatrizfernandez wenhan xingxu erbon tpreeprem farhat carpi bpb mcox GustavoLacerda jlgreen kieran101 Microbial-Ecology GIG gatech-compgenomics Green Lab iSEEM
  • Type III secretion systems and bacterial flagella: insights into their function from structural similarities.
    Proc Natl Acad Sci U S A, Vol. 100, No. 6. (18 March 2003), pp. 3027-3030.
    by A Blocker, K Komoriya, S Aizawa
    posted to flagella typeiii by bjorns on 2007-06-07 09:55:12 as ** along with 3 people balajis choonpeng cam-flagella
  • Bacterial flagellar diversity in the post-genomic era.
    Trends Microbiol, Vol. 13, No. 4. (April 2005), pp. 143-149.
    by MJ Pallen, CW Penn, RR Chaudhuri
    posted to flagella by bjorns on 2007-06-07 09:52:59 as **
  • Receptor and ligand domains for invasion of erythrocytes by Plasmodium falciparum.
    Science, Vol. 264, No. 5167. (24 June 1994), pp. 1941-1944.
    by BK Sim, CE Chitnis, K Wasniowska, TJ Hadley, LH Miller
    posted to erythrocytes by bjorns on 2007-06-05 07:19:01 as **
  • Evolutionary considerations in relating oligosaccharide diversity to biological function.
    Glycobiology, Vol. 9, No. 8. (August 1999), pp. 747-755.
    by P Gagneux, A Varki
    posted to erythrocytes by bjorns on 2007-06-05 07:16:30 as **
  • Evidence for diversifying selection on erythrocyte-binding antigens of Plasmodium falciparum and P. vivax.
    Genetics, Vol. 163, No. 4. (April 2003), pp. 1327-1336.
    by J Baum, AW Thomas, DJ Conway
    posted to diversifying erythrocytes by bjorns on 2007-06-03 16:28:21 as **
  • Natural selection on the erythrocyte surface.
    Mol Biol Evol, Vol. 19, No. 3. (March 2002), pp. 223-229.
    by J Baum, RH Ward, DJ Conway
    posted to diversifying erythrocytes by bjorns on 2007-06-03 16:28:00 as ** along with 1 person tomhebbron
  • The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse.
    Proc Natl Acad Sci U S A, Vol. 103, No. 42. (17 October 2006), pp. 15582-15587.
    by MP McLeod, RL Warren, WW Hsiao, N Araki, M Myhre, C Fernandes, D Miyazawa, W Wong, AL Lillquist, D Wang, M Dosanjh, H Hara, A Petrescu, RD Morin, G Yang, JM Stott, JE Schein, H Shin, D Smailus, AS Siddiqui, MA Marra, SJ Jones, R Holt, FS Brinkman, K Miyauchi, M Fukuda, JE Davies, WW Mohn, LD Eltis
    posted to duplications genome by bjorns on 2007-06-03 14:42:15 as ** along with 1 person treangen
  • Evolution of sensory complexity recorded in a myxobacterial genome
    PNAS, Vol. 103, No. 41. (10 October 2006), pp. 15200-15205.
    by BS Goldman, WC Nierman, D Kaiser, SC Slater, AS Durkin, JA Eisen, CM Ronning, WB Barbazuk, M Blanchard, C Field, C Halling, G Hinkle, O Iartchuk, HS Kim, C Mackenzie, R Madupu, N Miller, A Shvartsbeyn, SA Sullivan, M Vaudin, R Wiegand, HB Kaplan
    posted to duplications by bjorns on 2007-06-03 14:32:14 as ** along with 3 people treangen stajich blobbybirdman
  • Gene duplication and biased functional retention of paralogs in bacterial genomes.
    Trends Microbiol, Vol. 12, No. 4. (April 2004), pp. 148-154.
    by D Gevers, K Vandepoele, C Simillon, Y Van de Peer
    posted to duplications by bjorns on 2007-06-03 14:30:00 as **
  • The Orientia tsutsugamushi genome reveals massive proliferation of conjugative type IV secretion system and host-cell interaction genes.
    Proc Natl Acad Sci U S A, Vol. 104, No. 19. (8 May 2007), pp. 7981-7986.
    by NH Cho, HR Kim, JH Lee, SY Kim, J Kim, S Cha, SY Kim, AC Darby, HH Fuxelius, J Yin, JH Kim, J Kim, SJ Lee, YS Koh, WJ Jang, KH Park, SG Andersson, MS Choi, IS Kim
    posted to geneconversion molev repeats by bjorns on 2007-06-03 14:12:48 as ** along with 2 people operon treangen
  • Gene conversion drives within genic sequences: concerted evolution of ribosomal RNA genes in bacteria and archaea.
    J Mol Evol, Vol. 51, No. 4. (October 2000), pp. 305-317.
    by D Liao
    posted to geneconversion by bjorns on 2007-06-03 13:59:58 as **
  • Type II protein secretion and its relationship to bacterial type IV pili and archaeal flagella.
    Microbiology, Vol. 149, No. Pt 11. (November 2003), pp. 3051-3072.
    by CR Peabody, YJ Chung, MR Yen, D Vidal-Ingigliardi, AP Pugsley, MH Saier
    posted to typeii by bjorns on 2007-06-03 11:44:16 as **
  • Terminal reassortment drives the quantum evolution of type III effectors in bacterial pathogens.
    PLoS Pathog, Vol. 2, No. 10. (October 2006)
    by J Stavrinides, W Ma, DS Guttman
    posted to typeiii by bjorns on 2007-05-30 06:44:36 as **
  • Molecular evolution of the tprC, D, I, K, G, and J genes in the pathogenic genus Treponema.
    Mol Biol Evol, Vol. 23, No. 11. (November 2006), pp. 2220-2233.
    by RR Gray, CJ Mulligan, BJ Molini, ES Sun, L Giacani, C Godornes, A Kitchen, SA Lukehart, A Centurion-Lara
    posted to duplications geneconversion by bjorns on 2007-05-28 09:46:28 as **
  • Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography
    Genome Res., Vol. 17, No. 1. (1 January 2007), pp. 7-15.
    by Philippe Normand, Pascal Lapierre, Louis S Tisa, Johann P Gogarten, Nicole Alloisio, Emilie Bagnarol, Carla A Bassi, Alison M Berry, Derek M Bickhart, Nathalie Choisne, Arnaud Couloux, Benoit Cournoyer, Stephane Cruveiller, Vincent Daubin, Nadia Demange, Maria P Francino, Eugene Goltsman, Ying Huang, Olga R Kopp, Laurent Labarre, Alla Lapidus, Celine Lavire, Joelle Marechal, Michele Martinez, Juliana E Mastronunzio, Beth C Mullin, James Niemann, Pierre Pujic, Tania Rawnsley, Zoe Rouy, Chantal Schenowitz, Anita Sellstedt, Fernando Tavares, Jeffrey P Tomkins, David Vallenet, Claudio Valverde, Luis G Wall, Ying Wang, Claudine Medigue, David R Benson
    posted to duplications by bjorns on 2007-05-28 09:36:17 as ** along with 1 person operon
  • Multiple Gene Duplication and Rapid Evolution in the groEL Gene: Functional Implications
    Journal of Molecular Evolution, Vol. 63, No. 6. (December 2006), pp. 781-787.
    by Goyal, Kshama, Qamra, Rohini, Mande, C Shekhar
    posted to duplications by bjorns on 2007-05-28 09:32:52 as **
  • Genome analyses of three strains of Rhodobacter sphaeroides: evidence of rapid evolution of chromosome II.
    J Bacteriol, Vol. 189, No. 5. (March 2007), pp. 1914-1921.
    by M Choudhary, X Zanhua, YX Fu, S Kaplan
    posted to duplications genome strain by bjorns on 2007-05-28 09:29:23 as ** along with 1 person operon
  • Emulating membrane protein evolution by rational design.
    Science, Vol. 315, No. 5816. (2 March 2007), pp. 1282-1284.
    by M Rapp, S Seppälä, E Granseth, G von Heijne
    posted to duplications by bjorns on 2007-05-28 09:25:01 as ** along with 5 people and 1 group hc5428 grahamc martainn netterpaladin viktor21614 ParkinsonLab_at_MaRS
  • Insights into the evolutionary history of tubercle bacilli as disclosed by genetic rearrangements within a PE_PGRS duplicated gene pair
    BMC Evolutionary Biology, Vol. 6 (12 December 2006), 107.
    by Anis Karboul, Nicolaas, Amine Namouchi, Veronique Vincent, Christophe Sola, Nalin Rastogi, Philip Suffys, Michel Fabre, Angel Cataldi, Richard C Huard, Natalia Kurepina, Barry Kreiswirth, John L Ho, Cristina M Gutierrez, Helmi Mardassi
    posted to duplications repeats by bjorns on 2007-05-28 09:22:01 as ***
  • Comparison of partial citrate synthase gene (gltA) sequences for phylogenetic analysis of Bartonella species.
    Int J Syst Bacteriol, Vol. 46, No. 4. (October 1996), pp. 891-897.
    by RJ Birtles, D Raoult
    posted to bartonella phylogeny by bjorns on 2007-03-28 08:10:23 as **
  • Phylogenetic classification of Bartonella species by comparing groEL sequences.
    Int J Syst Evol Microbiol, Vol. 52, No. Pt 1. (January 2002), pp. 165-171.
    by Z Zeaiter, PE Fournier, H Ogata, D Raoult
    posted to bartonella phylogeny by bjorns on 2007-03-28 08:03:11 as **
  • Study of genotypes and virB4 secretion gene of Bartonella henselae strains from patients with clinically defined cat scratch disease.
    J Clin Microbiol, Vol. 42, No. 4. (April 2004), pp. 1420-1427.
    by S Woestyn, N Olivé, G Bigaignon, V Avesani, M Delmée
    posted to bartonella strain by bjorns on 2007-03-28 07:55:56 as **
  • Evidence of recombination between divergent hepatitis E viruses.
    J Virol, Vol. 79, No. 14. (July 2005), pp. 9306-9314.
    by H van Cuyck, J Fan, DL Robertson, P Roques
    posted to 4sis recombination by bjorns on 2007-03-27 13:35:50 as **
  • Detecting recombination from gene trees
    Mol Biol Evol, Vol. 15, No. 5. (1 May 1998), pp. 590-599.
    by Maynard, Nh Smith
    posted to 4sis recombination by bjorns on 2007-03-27 13:28:00 as ** along with 4 people druvus jmeppley AaronDarling Xavier
  • Novel type IV secretion system involved in propagation of genomic islands.
    J Bacteriol, Vol. 189, No. 3. (February 2007), pp. 761-771.
    by M Juhas, DW Crook, ID Dimopoulou, G Lunter, RM Harding, DJ Ferguson, DW Hood
    posted to typeiv by bjorns on 2007-03-07 12:29:23 as **
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