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cactus' fullatom [14 articles]

Artikler nylig sendt til cactus' bibliotek klassifisert med nøkkelordet fullatom. You can also see everyone's fullatom.
  • Protein folding under confinement: A role for solvent
    PNAS (11 June 2007), 0608256104.
    by Del Lucent, V Vishal, Vijay S Pande
    posted to simulation md fullatom for_ref confinement by cactus on 2008-09-29 11:12:32 as *** along with 4 people melting choonpeng cjeans rph
  • Entropic contributions and the influence of the hydrophobic environment in promiscuous protein-protein association
    Proceedings of the National Academy of Sciences, Vol. 105, No. 21. (27 May 2008), pp. 7456-7461.
    by Chia-En A Chang, William A Mclaughlin, Riccardo Baron, Wei Wang, Andrew J Mccammon
    posted to binding fullatom protein simulation by cactus on 2008-06-19 09:10:36 as ** along with 1 person higueruelo
  • Mechanochemical Coupling in the Myosin Motor Domain. I. Insights from Equilibrium Active-Site Simulations
    PLoS Computational Biology, Vol. 3, No. 2. (1 February 2007), e21.
    by Haibo Yu, Liang Ma, Yang Yang, Qiang Cui
    posted to fullatom md motor myosin qmmm by cactus on 2008-02-27 07:04:00 as **
  • Force Generation in Kinesin Hinges on Cover-Neck Bundle Formation
    Structure, Vol. 16, No. 1. (8 January 2008), pp. 62-71.
    by Wonmuk Hwang, Matthew J Lang, Martin Karplus
    posted to fullatom kinesin md motor by cactus on 2008-02-20 07:45:41 as **
  • Allosteric effects in the marginally stable von Hippel-Lindau tumor suppressor protein and allostery-based rescue mutant design
    Proceedings of the National Academy of Sciences, Vol. 105, No. 3. (22 January 2008), pp. 901-906.
    by Jin Liu, Ruth Nussinov
    posted to allostery design fullatom md mutation by cactus on 2008-02-13 07:31:01 as ** along with 1 person and 1 group sobolevnrm baker-group
  • The Unbinding of ATP from F1-ATPase
    Biophys. J., Vol. 85, No. 2. (1 August 2003), pp. 695-706.
    by Iris Antes, David Chandler, Hongyun Wang, George Oster
    posted to clip f1-atpase fullatom ligand md by cactus on 2007-12-06 13:25:44 as **
  • Large-scale allosteric conformational transitions of adenylate kinase appear to involve a population-shift mechanism
    Proceedings of the National Academy of Sciences (13 November 2007), 0706443104.
    by Karunesh Arora, Charles L Brooks
    posted to allostery binding free-energy fullatom ligand md structural_change by cactus on 2007-11-22 10:02:13 as ** along with 5 people and 2 groups barry allmensch sobolevnrm jlh64 karunesh structural_bioinformatics baker-group
  • From the Cover: Hierarchies, multiple energy barriers, and robustness govern the fracture mechanics of alpha-helical and beta-sheet protein domains
    Proceedings of the National Academy of Sciences, Vol. 104, No. 42. (16 October 2007), pp. 16410-16415.
    by Theodor Ackbarow, Xuefeng Chen, Sinan Keten, Markus J Buehler
    posted to clip2 force fullatom md stability by cactus on 2007-11-22 08:03:08 as ** along with 1 person choonpeng
  • A study of communication pathways in methionyl- tRNA synthetase by molecular dynamics simulations and structure network analysis
    Proceedings of the National Academy of Sciences, Vol. 104, No. 40. (2 October 2007), pp. 15711-15716.
    by Amit Ghosh, Saraswathi Vishveshwara
    posted to analysis correlation dynamics fullatom md by cactus on 2007-11-20 11:41:30 as ** along with 3 people and 1 group zwang sobolevnrm phoenixzxl baker-group
  • Open interface and large quaternary structure movements in 3D domain swapped proteins: insights from molecular dynamics simulations of the C-terminal swapped dimer of ribonuclease A.
    Biophys J, Vol. 88, No. 3. (March 2005), pp. 2003-2012.
    by A Merlino, MA Ceruso, L Vitagliano, L Mazzarella
    posted to dimer domain_swapping fullatom md rnase_a by cactus on 2007-10-12 09:18:19 as **
  • The Structural Coupling between ATPase Activation and Recovery Stroke in the Myosin II Motor
    Structure, Vol. 15, No. 7. (18 July 2007), pp. 825-837.
    by Sampath Koppole, Jeremy C Smith, Stefan Fischer
    posted to fullatom model myosin structural_change by cactus on 2007-08-08 11:23:07 as **
  • Molecular Dynamics Analysis of Structural Factors Influencing Back Door Pi Release in Myosin
    Biophys. J., Vol. 86, No. 6. (1 June 2004), pp. 3794-3803.
    by David J Lawson, Edward Pate, Ivan Rayment, Ralph G Yount
    posted to fullatom md motor myosin pi by cactus on 2007-06-06 18:18:15 as read
  • Hydrophobic Cooperativity as a Mechanism for Amyloid Nucleation
    Journal of Molecular Biology, Vol. 368, No. 3. (4 May 2007), pp. 894-901.
    by Jr Hills, Brooks
    posted to amyloid fullatom md model by cactus on 2007-05-07 10:20:16 as **
  • The Structure of the Alzheimer Amyloid [beta] 10-35 Peptide Probed through Replica-Exchange Molecular Dynamics Simulations in Explicit Solvent
    Journal of Molecular Biology, Vol. 366, No. 1. (9 February 2007), pp. 275-285.
    by Andrij Baumketner, Joan-Emma Shea
    posted to a-beta amyloid fullatom md by cactus on 2007-05-07 08:53:11 as ** along with 1 person carlescorbi
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