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cswinburnes senior-project [29 articles]

Artikler nylig sendt til cswinburnes bibliotek klassifisert med nøkkelordet senior-project. You can also see everyone's senior-project.
  • Search of Weighted Subgraphs on Complex Networks with Maximum Likelihood Methods
    (26 Sep 2008)
    by Mitrovic Marija, Bosiljka Tadic
    posted to senior-project networks by cswinburne on 2008-10-07 21:23:11 as ** along with 1 person dpf
  • Transitive functional annotation by shortest-path analysis of gene expression data.
    Proc Natl Acad Sci U S A, Vol. 99, No. 20. (1 October 2002), pp. 12783-12788.
    by X Zhou, MC Kao, WH Wong
    posted to senior-project networks by cswinburne on 2008-10-02 22:10:08 as ** along with 2 people and 1 group shivaram lfriedl kdl
  • Functional annotation and network reconstruction through cross-platform integration of microarray data
    Nature Biotechnology, Vol. 23, No. 2. (16 January 2005), pp. 238-243.
    by Xianghong J Zhou, Ming-Chih J Kao, Haiyan Huang, Angela Wong, Juan Nunez-Iglesias, Michael Primig, Oscar M Aparicio, Caleb E Finch, Todd E Morgan, Wing H Wong
    posted to senior-project networks by cswinburne on 2008-10-02 22:07:49 as ** along with 7 people and 2 groups setar andytseng imouthesmp lyongu wnpx rdiaz bsmagic Bioinformatics bioinplant
  • Discovering regulatory and signalling circuits in molecular interaction networks.
    Bioinformatics, Vol. 18 Suppl 1 (2002)
    by T Ideker, O Ozier, B Schwikowski, AF Siegel
    posted to senior-project networks by cswinburne on 2008-09-24 22:30:27 as ** along with 9 people and 2 groups isimpson yaredo dragonrez okarsligil lfriedl noano koller frohike carlk kdl Bioinformatics
  • Functional cartography of complex metabolic networks
    Nature, Vol. 433, No. 7028. (24 February 2005), pp. 895-900.
    by Roger Guimera, LAN Luis
    posted to senior-project networks by cswinburne on 2008-09-24 22:22:10 as ** along with 17 people and 4 groups pdelosri camster dbk BioGeek Borelli lfriedl balajis alexg eweaver tny wnpx cjeans kdang carlk RobMills Diego_Prada marcio streptomyces dbk-lab kdl Bioinformatics
  • Mathematical models in physiology
    Royal Society of London Philosophical Transactions Series A, Vol. 364 (May 2006), pp. 1099-1106.
    by D Gavaghan, A Garny, PK Maini, Et
    posted to senior-project modelling math by cswinburne on 2008-09-24 22:19:43 as **
  • Mutual information relevance networks: functional genomic clustering using pairwise entropy measurements.
    Pac Symp Biocomput (2000), pp. 418-429.
    by AJ Butte, IS Kohane
    posted to senior-project networks by cswinburne on 2008-09-24 22:12:46 as ** along with 1 person heliopais
  • The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo.
    Genome Biol, Vol. 7, No. 5. (2006)
    by R Bonneau, DJ Reiss, P Shannon, M Facciotti, L Hood, NS Baliga, V Thorsson
    posted to senior-project networks by cswinburne on 2008-09-24 22:10:23 as ** along with 5 people dragonrez jfr frohike roys jo_davies
  • How to infer gene networks from expression profiles
    Mol Syst Biol, Vol. 3 (13 February 2007)
    by Mukesh Bansal, Vincenzo Belcastro, Alberto Ambesi-Impiombato, Diego di Bernardo
    posted to senior-project networks by cswinburne on 2008-09-24 22:06:38 as ** along with 16 people and 2 groups druvus gabe_rosser jfr eckart_bindewald wnpx nickluscombe kengg mikaelhuss jrbanga BIBLIOma RockHI lp2 natstreet heliopais mariakmejia tmmurali EBI-regulation Plantandetc
  • Inference of gene regulatory networks and compound mode of action from time course gene expression profiles
    Bioinformatics, Vol. 22, No. 7. (1 April 2006), pp. 815-822.
    by Mukesh Bansal, Giusy D Gatta, Diego di Bernardo
    posted to senior-project networks by cswinburne on 2008-09-24 22:02:53 as ** along with 2 people ivokwee tvdbulck
  • An automated method for finding molecular complexes in large protein interaction networks.
    BMC Bioinformatics, Vol. 4, No. 1. (13 January 2003)
    by GD Bader, CW Hogue
    posted to senior-project networks by cswinburne on 2008-09-24 21:59:09 as ** along with 7 people and 1 group jiny dragonrez lfriedl nirfriedman massivemayhem carlk ethkim kdl
  • Network motifs: theory and experimental approaches
    Nature Reviews Genetics, Vol. 8, No. 6., pp. 450-461.
    by Uri Alon
    posted to senior-project networks by cswinburne on 2008-09-24 21:56:46 as ** along with 17 people and 4 groups dlobo kentz icases aalibes cmmorel jtaylor dbikard margaritis shigepong zwang grinfish Pascalichouchou xingxu karfunkel vietanh0 haarcuba Borelli GEB TNT Centre de Recherches Interdisciplinaires SynBioSys
  • Mining coherent dense subgraphs across massive biological networks for functional discovery
    Bioinformatics (2005), pp. i213-i221.
    by H Hu, X Yan, Y Huang, J Han, XJ Zhou
    posted to senior-project networks by cswinburne on 2008-09-24 00:37:07 as **
  • Further understanding human disease genes by comparing with housekeeping genes and other genes.
    BMC genomics, Vol. 7 (2006)
    by Z Tu, L Wang, M Xu, X Zhou, T Chen, F Sun
    posted to senior-project networks by cswinburne on 2008-09-24 00:26:17 as **
  • Gene Aging Nexus: a web database and data mining platform for microarray data on aging.
    Nucleic acids research, Vol. 35, No. Database issue. (January 2007)
    by F Pan, CH Chiu, S Pulapura, MR Mehan, J Nunez-Iglesias, K Zhang, K Kamath, MS Waterman, CE Finch, XJ Zhou
    posted to senior-project networks by cswinburne on 2008-09-24 00:18:45 as ** along with 1 person jyuh
  • Systematic discovery of functional modules and context-specific functional annotation of human genome
    Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i222-229.
    by Yu Huang, Haifeng Li, Haiyan Hu, Xifeng Yan, Michael S Waterman, Haiyan Huang, Xianghong J Zhou
    posted to senior-project networks by cswinburne on 2008-09-24 00:15:58 as ** along with 2 people jeremymiller cabbagezs
  • A graph-based approach to systematically reconstruct human transcriptional regulatory modules.
    Bioinformatics, Vol. 23, No. 13. (1 July 2007)
    by X Yan, MR Mehan, Y Huang, MS Waterman, PS Yu, XJ Zhou
    posted to senior-project networks by cswinburne on 2008-09-23 23:56:12 as ** along with 5 people jiny jfr shigepong dragonrez tmmurali
  • Microarray data mining: A novel optimization-based approach to uncover biologically coherent structures
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Meng Tan, Erin Smith, James Broach, Christodoulos Floudas
    posted to senior-project networks by cswinburne on 2008-09-23 16:24:00 as ** along with 4 people jfr GeeSharpMinor chrisamiller jyuh
  • An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer.
    BMC genomics, Vol. 9 Suppl 1 (2008)
    by M Xu, MC Kao, J Nunez-Iglesias, JR Nevins, M West, XJ Zhou
    posted to senior-project networks by cswinburne on 2008-09-23 16:18:02 as ** along with 3 people jyuh Zephyrus jfr
  • Network motifs: simple building blocks of complex networks.
    Science, Vol. 298, No. 5594. (25 October 2002), pp. 824-827.
    by R Milo, S Shen-Orr, S Itzkovitz, N Kashtan, D Chklovskii, U Alon
    posted to senior-project networks by cswinburne on 2008-09-21 16:45:29 as ** along with 42 people and 8 groups galyardt mullonc camster korakot aalibes ChaTo imouthesmp Borelli lfriedl alexg balicea tny ssb wnpx ddahlem cmm donade neveaire griota gurkanbebek jtaylor josepe iris_2001 michaelmampaey rebeccamancy karfunkel lenov Evangelia roys tfogal zibuyu maralena stefanoallesina pbull cmor renatomilani shikin carlk applesnow subhacom i-stevenson ethkim Philosophy_of_Information dbk-lab Blog_and_Wiki_Research kdl FAB-lab ColDyn ADMiRes GeneGo
  • New methods for joint analysis of biological networks and expression data.
    Bioinformatics, Vol. 20, No. 10. (10 July 2004), pp. 1517-1521.
    by F Sohler, D Hanisch, R Zimmer
    posted to networks senior-project by cswinburne on 2008-07-11 14:29:47 as ** along with 2 people incovoma TheresaNiederberger
  • A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression data
    BMC Bioinformatics, Vol. 8 (29 June 2007), 228.
    by Reuben Thomas, Carlos J Paredes, Sanjay Mehrotra, Vassily Hatzimanikatis, Eleftherios T Papoutsakis
    posted to networks senior-project by cswinburne on 2008-07-10 21:15:50 as **
  • Bayesian variable selection for the analysis of microarray data with censored outcomes.
    Bioinformatics, Vol. 22, No. 18. (15 September 2006), pp. 2262-2268.
    by N Sha, MG Tadesse, M Vannucci
    posted to networks senior-project by cswinburne on 2008-07-10 21:10:48 as ** along with 1 person frohike
  • GALGO: an R package for multivariate variable selection using genetic algorithms
    Bioinformatics, Vol. 22, No. 9. (1 May 2006), pp. 1154-1156.
    by Victor Trevino, Francesco Falciani
    posted to networks senior-project by cswinburne on 2008-07-10 21:06:36 as ** along with 2 people jyuh rsantana
  • Biomarker discovery in microarray gene expression data with Gaussian processes
    Bioinformatics, Vol. 21, No. 16. (15 August 2005), pp. 3385-3393.
    by Wei Chu, Zoubin Ghahramani, Francesco Falciani, David L Wild
    posted to networks senior-project by cswinburne on 2008-07-10 21:04:57 as ** along with 2 people Borelli edwardmorrissey
  • Models and computational strategies linking physiological response to molecular networks from large-scale data.
    Philosophical transactions. Series A, Mathematical, physical, and engineering sciences (17 June 2008)
    by Fernando Ortega, Katrin Sameith, Nil Turan, Russell Compton, Victor Trevino, Marina Vannucci, Francesco Falciani
    posted to networks senior-project by cswinburne on 2008-07-10 19:32:57 as **
  • A Bayesian approach to reconstructing genetic regulatory networks with hidden factors
    Bioinformatics, Vol. 21, No. 3. (01 February 2005), 349.
    by Matthew J Beal, Francesco Falciani, Zoubin Ghahramani, Claudia Rangel, David L Wild
    posted to networks senior-project by cswinburne on 2008-07-10 19:28:03 as ** along with 4 people Borelli edwardmorrissey helsley frohike
  • Methods and approaches in the analysis of gene expression data.
    Journal of immunological methods, Vol. 250, No. 1-2. (April 2001), pp. 93-112.
    by J Dopazo, E Zanders, I Dragoni, G Amphlett, F Falciani
    posted to networks senior-project by cswinburne on 2008-07-10 19:24:29 as **
  • Creative elements: network-based predictions of active centres in proteins, cellular and social networks
    (3 Jul 2008)
    by Peter Csermely
    posted to networks senior-project by cswinburne on 2008-07-09 15:15:39 as ** along with 1 person dpf
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