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djkts library [584 articles]

Nye artikler sendt til djkts bibliotek.
  • Human-Specific Gain of Function in a Developmental Enhancer
    Science, Vol. 321, No. 5894. (5 September 2008), pp. 1346-1350.
    by Shyam Prabhakar, Axel Visel, Jennifer A Akiyama, Malak Shoukry, Keith D Lewis, Amy Holt, Ingrid Plajzer-Frick, Harris Morrison, David R Fitzpatrick, Veena Afzal, Len A Pennacchio, Edward M Rubin, James P Noonan
    posted to tf evolution development acceleration by djkt on 2008-09-05 19:15:34 as ** along with 6 people sebastien_vigneau natstreet isimpson maximilianh caseybrown eskay
  • Shadow Enhancers as a Source of Evolutionary Novelty
    Science, Vol. 321, No. 5894. (5 September 2008), 1314.
    by Joung-Woo Hong, David A Hendrix, Michael S Levine
    posted to tf fly development by djkt on 2008-09-05 19:14:35 as ** along with 4 people and 1 group natstreet isimpson maximilianh caseybrown Jarman Lab
  • Metagenomics reveals our incomplete knowledge of global diversity.
    Bioinformatics (Oxford, England) (13 July 2008)
    by Miguel Pignatelli, Gabriel Aparicio, Ignacio Blanquer, Vicente Hernández, Andrés Moya, Javier Tamames
    posted to metagenomics diversity by djkt on 2008-09-05 19:09:34 as read along with 3 people and 1 group reyez bootsy nuin iSEEM
  • Phylocom: software for the analysis of phylogenetic community structure and trait evolution
    Bioinformatics, Vol. 24, No. 18. (15 September 2008), pp. 2098-2100.
    by Campbell O Webb, David D Ackerly, Steven W Kembel
    posted to phylogenetics diversity by djkt on 2008-09-05 19:03:43 as ** along with 1 group iSEEM
  • Considering dependence among genes and markers for false discovery control in eQTL mapping.
    Bioinformatics (Oxford, England) (17 July 2008)
    by Liang Chen, Tiejun Tong, Hongyu Zhao
    posted to qtl mtp expression by djkt on 2008-09-05 19:01:47 as ** along with 2 people jyuh orzenil
  • Segmental Duplications Arise from Pol32-Dependent Repair of Broken Forks through Two Alternative Replication-Based Mechanisms
    PLoS Genet, Vol. 4, No. 9. (2008), e1000175.
    by Celia Payen, Romain Koszul, Bernard Dujon, Gilles Fischer
    posted to yeast duplication by djkt on 2008-09-05 18:56:23 as **
  • Single-nucleotide mutation rate increases close to insertions/deletions in eukaryotes
    Nature (20 July 2008)
    by Dacheng Tian, Qiang Wang, Pengfei Zhang, Hitoshi Araki, Sihai Yang, Martin Kreitman, Thomas Nagylaki, Richard Hudson, Joy Bergelson, Jian-Qun Chen
    posted to snps mutation indel by djkt on 2008-09-04 17:40:37 as ** along with 5 people zwang psique caseybrown bpcusack gjuggler
  • The impact of microRNAs on protein output
    Nature (30 July 2008)
    by Daehyun Baek, Judit Villã©n, Chanseok Shin, Fernando D Camargo, Steven P Gygi, David P Bartel
    posted to rna expression by djkt on 2008-09-04 17:10:57 as ** along with 10 people giovenko mtagaya megraw brianb emptyhb erel10 maralena ajaymalik caizhiqiang gdb
  • A common sequence motif associated with recombination hot spots and genome instability in humans
    Nature Genetics, Vol. 40, No. 9. (24 August 2008), pp. 1124-1129.
    by Simon Myers, Colin Freeman, Adam Auton, Peter Donnelly, Gil Mcvean
    posted to recombination by djkt on 2008-09-02 18:59:17 as ** along with 1 person caseybrown
  • The Evolutionary Rate of Duplicated Genes under Concerted Evolution
    Genetics (30 August 2008), genetics.108.087676.
    by Shuhei Mano, Hideki Innan
    posted to selection evolution duplication bgc by djkt on 2008-09-01 20:06:17 as **
  • A Weighted-Holm Procedure accounting for allele frequencies in Genome-Wide Association Studies
    Genetics (24 August 2008), genetics.108.089839.
    by Cyril Dalmasso, Emmanuelle Genin, David-Alexandre Tregouet
    posted to popgen mtp association by djkt on 2008-09-01 19:59:34 as **
  • The Influence of Gene Conversion on Linkage Disequilibrium around a Selective Sweep
    Genetics (30 August 2008), genetics.108.092270.
    by Danielle A Jones, John Wakeley
    posted to selection recombination bgc by djkt on 2008-09-01 19:58:19 as **
  • Low duplicability and network fragility of cancer genes
    Trends in Genetics, Vol. 24, No. 9. (September 2008), pp. 427-430.
    by Davide Rambaldi, Federico M Giorgi, Fabrizio Capuani, Andrea Ciliberto, Francesca D Ciccarelli
    posted to duplication cancer by djkt on 2008-09-01 19:56:42 as ** along with 1 person tmmurali
  • Tracking the complex flow of chromosome rearrangements from the Hominoidea Ancestor to extant Hylobates and Nomascus Gibbons by high-resolution synteny mapping
    Genome Research, Vol. 18, No. 9., 1530.
    by Misceo
    posted to primates evolution duplication chromosome by djkt on 2008-09-01 19:12:56 as **
  • On the origin of new genes in Drosophila
    Genome Research, Vol. 18, No. 9., 1446.
    by Zhou
    posted to proteins fly evolution duplication by djkt on 2008-09-01 19:10:43 as **
  • A novel mode of enhancer evolution: The Tal1 stem cell enhancer recruited a MIR element to specifically boost its activity
    Genome Research, Vol. 18, No. 9., 1422.
    by Smith
    posted to tf evolution duplication by djkt on 2008-09-01 19:07:49 as **
  • Pervasive positive selection on duplicated and nonduplicated vertebrate protein coding genes
    Genome Research, Vol. 18, No. 9., 1393.
    by Studer
    posted to selection proteins duplication by djkt on 2008-09-01 19:03:24 as ***
  • Resolving Individuals Contributing Trace Amounts of DNA to Highly Complex Mixtures Using High-Density SNP Genotyping Microarrays
    PLoS Genet, Vol. 4, No. 8. (2008), e1000167.
    by Nils Homer, Szabolcs Szelinger, Margot Redman, David Duggan, Waibhav Tembe, Jill Muehling, John V Pearson, Dietrich A Stephan, Stanley F Nelson, David W Craig
    posted to snps metagenomics by djkt on 2008-09-01 18:55:00 as ** along with 3 people jasonbobe rs fpattyn
  • Modeling ChIP Sequencing In Silico with Applications
    PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000158.
    by Zhengdong D Zhang, Joel Rozowsky, Michael Snyder, Joseph Chang, Mark Gerstein
    posted to chip-chip sequencing by djkt on 2008-08-22 18:20:29 as ** along with 5 people aramesh2 kengg Stew gdb caseybrown
  • Predicting Human Nucleosome Occupancy from Primary Sequence
    PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000134.
    by Shobhit Gupta, Jonathan Dennis, Robert E Thurman, Robert Kingston, John A Stamatoyannopoulos, William S Noble
    posted to epigenetics nucleosome prediction by djkt on 2008-08-22 18:17:54 as *** along with 2 people Stew aalibes
  • Significant contribution of Archaea to extant biomass in marine subsurface sediments
    Nature (20 July 2008)
    by Julius S Lipp, Yuki Morono, Fumio Inagaki, Kai-Uwe Hinrichs
    posted to ecology metagenomics microbes by djkt on 2008-08-20 20:14:10 as *** along with 1 person and 1 group neils iSEEM
  • Direct Estimation of the Mitochondrial DNA Mutation Rate in Drosophila melanogaster
    PLoS Biology, Vol. 6, No. 8. (1 August 2008), e204.
    by Cathy Haag-Liautard, Nicole Coffey, David Houle, Michael Lynch, Brian Charlesworth, Peter D Keightley
    posted to evolution fly indel molclock snps by djkt on 2008-08-19 19:18:55 as *** along with 1 person aprasad
  • Gene Dosage and Gene Duplicability
    Genetics, Vol. 179 (2008), pp. 2319-2324.
    by Wenfeng Qian, Jianzhi Zhang
    posted to duplication evolution proteins by djkt on 2008-08-19 02:15:55 as **
  • Reduced purifying selection prevails over positive selection in human copy number variant evolution
    Genome Research (2008)
    by Nguyen
    posted to evolution human selection sv by djkt on 2008-08-18 21:19:48 as ***
  • Integrating biological data - the Distributed Annotation System
    BMC Bioinformatics, Vol. 9, No. Suppl 8. (2008)
    by Andrew Jenkinson, Mario Albrecht, Ewan Birney, Hagen Blankenburg, Thomas Down, Robert Finn, Henning Hermjakob, Tim Hubbard, Rafael Jimenez, Philip Jones, Andreas Kahari, Eugene Kulesha, Jose Macias, Gabrielle Reeves, Andreas Prlic
    posted to db by djkt on 2008-08-18 21:16:46 as ** along with 3 people jyuh chad_davis aconesa
  • Genomic analysis of the relationship between gene expression variation and DNA polymorphism in Drosophila simulans
    Genome Biology, Vol. 9, No. 8. (2008)
    by Mara Lawniczak, Alisha Holloway, David Begun, Corbin Jones
    posted to expression fly popgen variation by djkt on 2008-08-18 21:15:41 as ** along with 3 people and 1 group APRegier caseybrown cisevol cis-regulatory-evolution
  • Computational Improvements Reveal Great Bacterial Diversity and High Metal Toxicity in Soil
    Science, Vol. 309, No. 5739. (26 August 2005), pp. 1387-1390.
    by Jason Gans, Murray Wolinsky, John Dunbar
    posted to diversity ecology metagenomics microbes by djkt on 2008-08-15 18:22:43 as ** along with 4 people and 1 group knaseanka jmeppley paleorthid jlgreen iSEEM
  • Binning sequences using very sparse labels within a metagenome
    BMC Bioinformatics, Vol. 9 (28 April 2008), 215.
    by Chon-Kit K Chan, Arthur L Hsu, Saman K Halgamuge, Sen-Lin Tang
    posted to metagenomics microbes by djkt on 2008-08-15 18:13:29 as ** along with 4 people and 2 groups alexl mjetten werwiesel jlgreen microbiology_nijmegen iSEEM
  • The Airborne Metagenome in an Indoor Urban Environment
    PLoS ONE, Vol. 3, No. 4. (2 April 2008), e1862.
    by Susannah G Tringe, Tao Zhang, Xuguo Liu, Yiting Yu, Wah H Lee, Jennifer Yap, Fei Yao, Sim T Suan, Seah K Ing, Matthew Haynes, Forest Rohwer, Chia L Wei, Patrick Tan, James Bristow, Edward M Rubin, Yijun Ruan
    posted to metagenomics microbes by djkt on 2008-08-15 17:55:03 as *** along with 1 person and 1 group semrich iSEEM
  • Genetic Variation in an Individual Human Exome
    PLoS Genet, Vol. 4, No. 8. (2008), e1000160.
    by Pauline C Ng, Samuel Levy, Jiaqi Huang, Timothy B Stockwell, Brian P Walenz, Kelvin Li, Nelson Axelrod, Dana A Busam, Robert L Strausberg, Craig J Venter
    posted to human popgen proteins sequencing snps by djkt on 2008-08-15 17:26:39 as *** along with 5 people bpcusack caseybrown Ema jyuh reyez
  • Selective Constraints in Experimentally Defined Primate Regulatory Regions
    PLoS Genet, Vol. 4, No. 8. (2008), e1000157.
    by Daniel J Gaffney, Ran Blekhman, Jacek Majewski
    posted to annotation chip-chip conservation evolution expression primates tf by djkt on 2008-08-15 17:24:04 as read along with 7 people and 2 groups alhufton bpcusack aprasad pradiptaray caseybrown maximilianh cisevol BergmanLab cis-regulatory-evolution
  • A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome
    Science (3 July 2008), 1160342.
    by Marc Sultan, Marcel H Schulz, Hugues Richard, Alon Magen, Andreas Klingenhoff, Matthias Scherf, Martin Seifert, Tatjana Borodina, Aleksey Soldatov, Dmitri Parkhomchuk, Dominic Schmidt, Sean O'Keeffe, Stefan Haas, Martin Vingron, Hans Lehrach, Marie-Laure Yaspo
    posted to expression sequencing by djkt on 2008-08-15 02:02:43 as ** along with 10 people and 1 group oelemento Ema reyez caseybrown kjglennie dh0000 GeeSharpMinor balicea ArtemPankin zwang Khavkin's lab
  • A discontinuous hammerhead ribozyme embedded in a mammalian messenger RNA
    Nature (09 July 2008)
    by Monika Martick, Lucas H Horan, Harry F Noller, William G Scott
    posted to mammals rna by djkt on 2008-08-13 21:09:09 as ** along with 1 person mtagaya
  • The relationship between homozygosity and the frequency of the most frequent allele
    Genetics (9 August 2008), genetics.107.084772.
    by Noah A Rosenberg, Mattias Jakobsson
    posted to popgen by djkt on 2008-08-10 17:02:15 as **
  • Comparative analysis of testis protein evolution in rodents
    Genetics (9 August 2008), genetics.107.085902.
    by Leslie M Turner, Edward B Chuong, Hopi E Hoekstra
    posted to proteins rodents selection by djkt on 2008-08-10 17:00:49 as ** along with 2 people aprasad dchughes
  • Cut thy Neighbor: Cyclic Birth and Death of Recombination Hotspots via Genetic Conflict
    Genetics (9 August 2008), genetics.107.085563.
    by Urban Friberg, William R Rice
    posted to bgc recombination selection by djkt on 2008-08-10 16:57:23 as **
  • Bayesian QTL Mapping for Multiple Traits
    Genetics (9 August 2008), genetics.108.088427.
    by Samprit Banerjee, Brian S Yandell, Nengjun Yi
    posted to qtl by djkt on 2008-08-10 16:56:04 as ** along with 1 person jyuh
  • An empirical test for branch-specific positive selection
    Genetics (9 August 2008), genetics.108.090548.
    by Gabrielle C Nickel, David L Tefft, Karrie Goglin, Mark D Adams
    posted to evolution human proteins selection by djkt on 2008-08-10 16:54:37 as **
  • Segment-based multiple sequence alignment
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i187-192.
    by Tobias Rausch, Anne-Katrin Emde, David Weese, Andreas Doring, Cedric Notredame, Knut Reinert
    posted to alignment msa by djkt on 2008-08-09 17:19:25 as ** along with 6 people zwang Ema APRegier aprasad groepl chad_davis
  • Analysis of segmental duplications via duplication distance
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i133-138.
    by Crystal L Kahn, Benjamin J Raphael
    posted to duplication evolution by djkt on 2008-08-09 17:17:07 as **
  • Predicting Functional Regulatory Polymorphisms.
    Bioinformatics (Oxford, England) (18 June 2008)
    by Ali Torkamani, Nicholas J J Schork
    posted to prediction snps tf by djkt on 2008-08-09 17:13:40 as ** along with 2 people jyuh ramensky
  • Metabolic changes in schizophrenia and human brain evolution
    Genome Biology, Vol. 9 (05 August 2008), R124.
    by Philipp Khaitovich, Helen E Lockstone, Matthew T Wayland, Tsz M Tsang, Samantha D Jayatilaka, Arfu J Guo, Jie Zhou, Mehmet Somel, Laura W Harris, Elaine Holmes, Svante Paabo, Sabine Bahn
    posted to evolution schizophrenia by djkt on 2008-08-09 05:18:52 as ** along with 1 person balicea
  • The ethics of characterizing difference: guiding principles on using racial categories in human genetics
    Genome Biology, Vol. 9 (15 July 2008), 404.
    by Sandra S Lee, Joanna Mountain, Barbara Koenig, Russ Altman, Melissa Brown, Albert Camarillo, Luca Cavalli-Sforza, Mildred Cho, Jennifer Eberhardt, Marcus Feldman, Richard Ford, Henry Greely, Roy King, Hazel Markus, Debra Satz, Matthew Snipp, Claude Steele, Peter Underhill
    posted to ethics human popgen by djkt on 2008-08-09 05:17:21 as ** along with 2 people aristos81 jasonbobe
  • Evolutionary Convergence on Highly-Conserved 3′ Intron Structures in Intron-Poor Eukaryotes and Insights into the Ancestral Eukaryotic Genome
    PLoS Genet, Vol. 4, No. 8. (2008), e1000148.
    by Manuel Irimia, Scott W Roy
    posted to evolution intron by djkt on 2008-08-08 19:21:10 as **
  • Hindsight in the relative abundance, metabolic potential and genome dynamics of uncultivated marine archaea from comparative metagenomic analyses of bathypelagic plankton of different oceanic regions
    ISME J, Vol. 2, No. 8. (May 2008), pp. 865-886.
    by Ana-Belen Martin-Cuadrado, Francisco Rodriguez-Valera, David Moreira, Jose C Alba, Elena Ivars-Martinez, Matthew R Henn, Emmanuel Talla, Purificacion Lopez-Garcia
    posted to diversity ecology metagenomics microbes by djkt on 2008-08-08 02:28:19 as read along with 1 person and 2 groups jlgreen Green Lab iSEEM
  • Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment
    PNAS
    by Biddle
    posted to metagenomics microbes by djkt on 2008-08-08 02:24:01 as ** along with 1 person and 2 groups jlgreen Green Lab iSEEM
  • The rational exploration of microbial diversity
    ISME (2008)
    by Christopher Quince, Thomas P Curtis, William T Sloan
    posted to diversity metagenomics microbes by djkt on 2008-08-08 02:14:18 as read along with 1 person and 2 groups jlgreen Green Lab iSEEM
  • The evolutionary ecology of metacommunities.
    Trends in ecology & evolution (Personal edition), Vol. 23, No. 6. (June 2008), pp. 311-317.
    by MC Urban, MA Leibold, P Amarasekare, L De Meester, R Gomulkiewicz, ME Hochberg, CA Klausmeier, N Loeuille, C de Mazancourt, J Norberg, JH Pantel, SY Strauss, M Vellend, MJ Wade
    posted to diversity ecology evolution by djkt on 2008-08-08 02:01:48 as read along with 2 people and 2 groups skumagai jlgreen Green Lab iSEEM
  • Context-Dependent Mutation Rates May Cause Spurious Signatures of a Fixation Bias Favoring Higher GC-Content in Humans
    Mol Biol Evol, Vol. 24, No. 10. (1 October 2007), pp. 2196-2202.
    by Ryan D Hernandez, Scott H Williamson, Lan Zhu, Carlos D Bustamante
    posted to bgc popgen by djkt on 2008-08-08 01:37:37 as **
  • Context dependence, ancestral misidentification, and spurious signatures of natural selection
    Mol. Biol. Evol., Vol. 24, No. 8. (2007), pp. 1792-1800.
    by RD Hernandez, SH Williamson, CD Bustamante
    posted to msa popgen snps by djkt on 2008-08-08 01:33:45 as ** along with 2 people bpb pradiptaray
    • NB: Du kan sitere denne siden som: http://www.citeulike.org/user/djkt

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