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neils' library [479 articles]

Nye artikler sendt til neils' bibliotek i prioritert rekkefølge .
  • Protein secretion and outer membrane assembly in Alphaproteobacteria
    FEMS Microbiology Reviews, Vol. 9999, No. 9999. (2008)
    by Xenia Gatsos, Andrew J Perry, Khatira Anwari, Pavel Dolezal, Peter P Wolynec, Vladimir A Liki0107, Anthony W Purcell, Susan K Buchanan, Trevor Lithgow
    posted to secretion membrane beta-barrel bacteria alphaproteobacteria by neils on 2008-09-05 05:45:46 as **
  • Successive and Selective Release of Phosphorylated Peptides Captured by Hydroxy Acid-Modified Metal Oxide Chromatography
    J. Proteome Res. (4 September 2008)
    by Yutaka Kyono, Naoyuki Sugiyama, Koshi Imami, Masaru Tomita, Yasushi Ishihama
    posted to purification proteomics phosphopeptides chromatography by neils on 2008-09-05 00:34:41 as **
  • Identification of Four Novel Types of in Vitro Protein Modifications
    J. Proteome Res. (4 September 2008)
    by Gang Xing, Junmei Zhang, Yue Chen, Yingming Zhao
    posted to ptm proteomics post-translational modification lc-ms by neils on 2008-09-05 00:33:02 as ** along with 1 person brianb
  • Big data: The future of biocuration
    Nature, Vol. 455, No. 7209. (2008), pp. 47-50.
    by Doug Howe, Maria Costanzo, Petra Fey, Takashi Gojobori, Linda Hannick, Winston Hide, David P Hill, Renate Kania, Mary Schaeffer, Susan St Pierre, Simon Twigger, Owen White, Yon
    posted to review recommendation proposal database curation career bioinformatics by neils on 2008-09-04 05:44:55 as ** along with 3 people psique fgibson dullhunk
  • Polo-like kinase-1 is activated by aurora A to promote checkpoint recovery
    Nature (09 July 2008)
    by Libor Macůrek, Arne Lindqvist, Dan Lim, Michael A Lampson, Rob Klompmaker, Raimundo Freire, Christophe Clouin, Stephen S Taylor, Michael B Yaffe, René H Medema
    posted to polo kinase checkpoint aurora-a activation by neils on 2008-09-04 00:19:59 as ** along with 1 person taruho
  • Widespread changes in protein synthesis induced by microRNAs
    Nature (30 July 2008)
    by Matthias Selbach, Björn Schwanhäusser, Nadine Thierfelder, Zhuo Fang, Raya Khanin, Nikolaus Rajewsky
    posted to proteomics protein ncrna expression by neils on 2008-09-04 00:19:05 as ** along with 8 people psique megraw j_rodriguez erel10 maralena reyez mtagaya gdb
  • Prediction of Peptidase Category Based on Functional Domain Composition
    J. Proteome Res. (3 September 2008)
    by Xiaochun Xu, Dong Yu, Wei Fang, Yushao Cheng, Ziliang Qian, Wencong Lu, Yudong Cai, Kaiyan Feng
    posted to prediction peptidase function domain bioinformatics by neils on 2008-09-03 13:22:31 as **
  • Methanogenic archaea in health and disease: A novel paradigm of microbial pathogenesis.
    International journal of medical microbiology : IJMM (29 August 2008)
    by Everly Conway de Macario, Alberto J L J Macario
    posted to review pathogen methanogen archaea by neils on 2008-09-03 08:33:36 as **
  • notes Genome-Scale Computational Biology and Bioinformatics in Australia
    PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000068.
    by Mark A Ragan, Tim Littlejohn, Bruce Ross
    posted to australia bioinformatics genomics infrastructure review by neils on 2008-09-01 02:03:26 as ** along with 2 people barry AbnerCYH
  • TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model
    BMC Bioinformatics, Vol. 9 (31 August 2008), 358.
    by Mallika Veeramalai, Yuzhen Ye, Adam Godzik
    posted to alignment bioinformatics prediction software structural by neils on 2008-09-01 01:38:46 as ** along with 1 person reyez
  • Impact of residue accessible surface area on the prediction of protein secondary structures
    BMC Bioinformatics, Vol. 9 (31 August 2008), 357.
    by Amir Momen-Roknabadi, Mehdi Sadeghi, Hamid Pezeshk, Sayed-Amir Marashi
    posted to accessibility bioinformatics prediction secondary structure surface by neils on 2008-09-01 01:31:22 as **
  • Cold Adaptation of Enzyme Reaction Rates
    Biochemistry (30 August 2008)
    by Sinisa Bjelic, Bjørn O Brandsdal, Johan Åqvist
    posted to adaptation cold enyzme kinetics psychrophily reaction by neils on 2008-08-31 03:15:35 as **
  • pH-Induced Conformational Change of the Influenza M2 Protein C-Terminal Domain
    Biochemistry (29 August 2008)
    by Phuong A Nguyen, Cinque S Soto, Alexei Polishchuk, Gregory A Caputo, Chad D Tatko, Chunlong Ma, Yuki Ohigashi, Lawrence H Pinto, William F Degrado, Kathleen P Howard
    posted to conformation domain epr influenza m2 virus by neils on 2008-08-29 08:58:34 as ** along with 1 person paulschlesinger
  • Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Nicole Quinn, Natasha Levenkova, William Chow, Pascal Bouffard, Keith Boroevich, James Knight, Thomas Jarvie, Krzysztof Lubieniecki, Brian Desany, Ben Koop, Timothy Harkins, Davidson Davidson
    posted to fish genome pyrosequencing salmon by neils on 2008-08-29 06:41:19 as **
  • The structural basis for an essential subunit interaction in influenza virus RNA polymerase
    Nature (27 July 2008)
    by Eiji Obayashi, Hisashi Yoshida, Fumihiro Kawai, Naoya Shibayama, Atsushi Kawaguchi, Kyosuke Nagata, Jeremy RH Tame, Sam-Yong Park
    posted to interaction polymerase protein-protein subunit virus by neils on 2008-08-28 00:47:44 as **
  • Crystal structure of the polymerase PAC–PB1N complex from an avian influenza H5N1 virus
    Nature (09 July 2008)
    by Xiaojing He, Jie Zhou, Mark Bartlam, Rongguang Zhang, Jianyuan Ma, Zhiyong Lou, Xuemei Li, Jingjing Li, Andrzej Joachimiak, Zonghao Zeng, Ruowen Ge, Zihe Rao, Yingfang Liu
    posted to avian complex crystallography h5n1 polymerase structure virus by neils on 2008-08-28 00:46:13 as **
  • Alignment of protein structures in the presence of domain motions
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Roberto Mosca, Barbara Brannetti, Thomas Schneider
    posted to alignment bioinformatics domain motion protein structure by neils on 2008-08-28 00:46:10 as ** along with 2 people reyez vinithepooh
  • Identification and correction of abnormal, incomplete and mispredicted proteins in public databases
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Alinda Nagy, Hedi Hegyi, Krisztina Farkas, Hedvig Tordai, Evelin Kozma, Laszlo Banyai, Laszlo Patthy
    posted to bioinformatics database errors prediction protein sequence structure by neils on 2008-08-28 00:42:01 as ** along with 2 people grahamc piergiorgioduca
  • Discovering regulatory motifs in the Plasmodium genome using comparative genomics.
    Bioinformatics (Oxford, England) (8 July 2008)
    by Jie Wu, Douglas H H Sieglaff, Joshua Gervin, Xiaohui S S Xie
    posted to comparative genomics motifs plasmodium regulation by neils on 2008-08-25 13:48:34 as ** along with 3 people APRegier semrich Neeperando
  • Protein structure search and local structure characterization
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Shih Y Ku, Yuh J Hu
    posted to alphabet bioinformatics protein search structure by neils on 2008-08-23 02:16:28 as ** along with 2 people chad_davis reyez
  • Detection of Large Numbers of Novel Sequences in the Metatranscriptomes of Complex Marine Microbial Communities
    PLoS ONE, Vol. 3, No. 8. (2008), e3042.
    by Jack A Gilbert, Dawn Field, Ying Huang, Rob Edwards, Weizhong Li, Paul Gilna, Ian Joint
    posted to metagenomics microbiology sequencing transcriptomics by neils on 2008-08-23 02:15:14 as **
  • High-Quality Binary Protein Interaction Map of the Yeast Interactome Network
    Science (21 August 2008), 1158684.
    by Haiyuan Yu, Pascal Braun, Muhammed A Yildirim, Irma Lemmens, Kavitha Venkatesan, Julie Sahalie, Tomoko Hirozane-Kishikawa, Fana Gebreab, Na Li, Nicolas Simonis, Tong Hao, Jean-Francois Rual, Amelie Dricot, Alexei Vazquez, Ryan R Murray, Christophe Simon, Leah Tardivo, Stanley Tam, Nenad Svrzikapa, Changyu Fan, Anne-Sophie de Smet, Adriana Motyl, Michael E Hudson, Juyong Park, Xiaofeng Xin, Michael E Cusick, Troy Moore, Charlie Boone, Michael Snyder, Frederick P Roth, Albert-Laszlo Barabasi, Jan Tavernier, David E Hill, Marc Vidal
    posted to binary interactome map network protein-protein yeast by neils on 2008-08-22 13:14:11 as ** along with 4 people grahamc yeastyboy jyuh maralena
  • Significant contribution of Archaea to extant biomass in marine subsurface sediments
    Nature (20 July 2008)
    by Julius S Lipp, Yuki Morono, Fumio Inagaki, Kai-Uwe Hinrichs
    posted to archaea biomass ecology marine by neils on 2008-08-21 00:13:53 as ** along with 1 person and 1 group djkt iSEEM
  • Towards a cyberinfrastructure for the biological sciences: progress, visions and challenges
    Nat Rev Genet, Vol. 9, No. 9. (2008), pp. 678-688.
    by Lincoln D Stein
    posted to bioinformatics infrastructure review by neils on 2008-08-20 00:10:27 as ** along with 16 people and 4 groups carolh12 ilya alaninmcr druvus srp33 dullhunk tharris stajich mrochman dansullivanblk jandot GustavoLacerda jago fgibson thomaskelder sjcockell Berkeley Mycology Global_health_enterprise_architecture Knowledge_Economy_Reform kpa-resources
  • notes Predicting PDZ domain-peptide interactions from primary sequences
    Nat Biotech, Vol. advanced online publication (2008)
    by Jiunn R Chen, Bryan H Chang, John E Allen, Michael A Stiffler, Gavin Macbeath
    posted to bioinformatics domain interaction pdz peptide prediction protein-protein by neils on 2008-08-19 00:19:29 as **
  • Complete genome of Phenylobacterium zucineum - a novel facultative intracellular bacterium isolated from human erythroleukemia cell line K562
    BMC Genomics, Vol. 9 (13 August 2008), 386.
    by Yingfeng Luo, Xiaoli Xu, Zonghui Ding, Zhen Liu, Bing Zhang, Zhiyu Yan, Jie Sun, Songnian Hu, Xun Hu
    posted to bacteria genome phenylobacterium symbiosis by neils on 2008-08-17 08:00:31 as **
  • High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Evandro Novaes, Derek Drost, William Farmerie, Georgios Pappas, Dario Grattapaglia, Ronald Sederoff, Matias Kirst
    posted to annotation eucalyptus genomics plant snp by neils on 2008-08-17 07:57:24 as ** along with 3 people natstreet gpappas GustavoLacerda
  • Immobilized Metal Affinity Chromatography Revisited: pH/Acid Control toward High Selectivity in Phosphoproteomics
    J. Proteome Res. (16 August 2008)
    by Chia-Feng Tsai, Yi-Ting Wang, Yet-Ran Chen, Chen-Yu Lai, Pei-Yi Lin, Kuan-Ting Pan, Jeou-Yuan Chen, Kay-Hooi Khoo, Yu-Ju Chen
    posted to chromatography phosphopeptides proteomics purification by neils on 2008-08-16 12:07:38 as ** along with 1 person brianb
  • Small CRISPR RNAs Guide Antiviral Defense in Prokaryotes
    Science, Vol. 321, No. 5891. (15 August 2008), pp. 960-964.
    by Stan J Brouns, Matthijs M Jore, Magnus Lundgren, Edze R Westra, Rik J Slijkhuis, Ambrosius P Snijders, Mark J Dickman, Kira S Makarova, Eugene V Koonin, John van der Oost
    posted to crispr defence prokaryote rna virus by neils on 2008-08-15 03:38:59 as ** along with 1 person zwang
  • The cis-regulatory map of Shewanella genomes
    Nucl. Acids Res. (13 August 2008), gkn515.
    by Jiajian Liu, Xing Xu, Gary D Stormo
    posted to bacteria genomics regulation shewanella by neils on 2008-08-14 08:37:37 as **
  • Penalized feature selection and classification in bioinformatics
    Brief Bioinform, Vol. 9, No. 5. (1 September 2008), pp. 392-403.
    by Shuangge Ma, Jian Huang
    posted to bioinformatics classification feature review selection by neils on 2008-08-13 23:49:44 as ** along with 1 person robertvandenberg
  • Impacts of protein-protein interaction domains on organism and network complexity
    Genome Res., Vol. 18 (2008), pp. 1500-1508.
    by Kai Xia, Zheng Fu, Lei Hou, Jing
    posted to complexity domain interaction network protein-protein by neils on 2008-08-13 01:28:04 as **
  • Gain and loss of phosphorylation sites in human cancer
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i241-247.
    by Predrag Radivojac, Peter H Baenziger, Maricel G Kann, Matthew E Mort, Matthew W Hahn, Sean D Mooney
    posted to cancer human mutation phosphorylation substrate by neils on 2008-08-11 00:38:19 as ** along with 1 person brianb
  • Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i105-111.
    by Rafael Najmanovich, Natalja Kurbatova, Janet Thornton
    posted to binding discrimination ligand protein similarity structure by neils on 2008-08-11 00:37:28 as ** along with 2 people reyez nickolay
  • An integrative approach for predicting interactions of protein regions
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i35-41.
    by Sven-Eric Schelhorn, Thomas Lengauer, Mario Albrecht
    posted to integration interaction prediction protein-protein by neils on 2008-08-11 00:36:09 as ** along with 2 people zwang kluck
  • PhosphoPOINT: a comprehensive human kinase interactome and phospho-protein database
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i14-20.
    by Chia-Ying Yang, Chao-Hui Chang, Ya-Ling Yu, Tsu-Chun E Lin, Sheng-An Lee, Chueh-Chuan Yen, Jinn-Moon Yang, Jin-Mei Lai, Yi-Ren Hong, Tzu-Ling Tseng, Kun-Mao Chao, Chi-Ying F Huang
    posted to database human interactome kinase phosphoprotein by neils on 2008-08-11 00:35:03 as ** along with 3 people Yanno renatomilani brianb
  • Annotation of metagenome short reads using proxygenes
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i7-13.
    by Daniel Dalevi, Natalia N Ivanova, Konstantinos Mavromatis, Sean D Hooper, Ernest Szeto, Philip Hugenholtz, Nikos C Kyrpides, Victor M Markowitz
    posted to 454 annotation genome metagenomics by neils on 2008-08-11 00:33:57 as **
  • A Complete Neandertal Mitochondrial Genome Sequence Determined by High-Throughput Sequencing
    Cell, Vol. Vol 134 (August 2008), pp. 416-426.
    by Richard E Green, Anna, Johannes Krause, Adrian W Briggs, Philip LF Johnson, Caroline Uhler, Matthias Meyer, Jeffrey M Good, Tomislav Maricic, Udo Stenzel, Kay Prüfer, Michael Siebauer, Hernán A Burbano, Michael Ronan, Jonathan M Rothberg, Michael Egholm, Pavao Rudan, Dejana Brajković, Željko Kućan, Ivan Gušić, Mårten Wikström, Liisa Laakkonen, Janet Kelso, Montgomery Slatkin, Svante Pääbo
    posted to ancient dna mitochondria neandertal sequencing by neils on 2008-08-09 04:26:35 as **
  • Survey of group I and group II introns in 29 sequenced genomes of the Bacillus cereus group: insights into their spread and evolution
    Nucl. Acids Res., Vol. 36, No. 14. (1 August 2008), pp. 4529-4548.
    by Nicolas J Tourasse, Anne-Brit Kolsto
    posted to bacillus bacteria evolution genomics introns by neils on 2008-08-08 02:10:27 as **
  • A protein-DNA docking benchmark
    Nucl. Acids Res., Vol. 36, No. 14. (1 August 2008), e88.
    by Marc van Dijk, Alexandre M Bonvin
    posted to benchmark docking protein-dna by neils on 2008-08-08 02:09:13 as ** along with 2 people reyez boris_aguilar
  • An evaluation of human protein-protein interaction data in the public domain
    BMC Bioinformatics, Vol. 7, No. Suppl 5. (2006)
    by Suresh Mathivanan, Balamurugan Periaswamy, TKB Gandhi, Kumaran Kandasamy, Shubha Suresh, Riaz Mohmood, YL Ramachandra, Akhilesh Pandey
    posted to database human interaction protein-protein review by neils on 2008-08-06 05:27:51 as ** along with 7 people and 1 group frohike grahamc alwinpremanand lpfernandes hpaces zdai renatomilani Bioinformatics
  • Early vertebrate whole genome duplications were predated by a period of intense genome rearrangement
    Genome Res. (14 July 2008), gr.080119.108.
    by Andrew L Hufton, Detlef Groth, Martin Vingron, Hans Lehrach, Albert J Poustka, Georgia Panopoulou
    posted to duplication evolution genome genomics rearrangement vertebrate by neils on 2008-07-15 04:48:45 as ** along with 2 people and 1 group alhufton cisevol BergmanLab
  • Revealing unique properties of the ribosome using a network based analysis
    Nucl. Acids Res. (14 July 2008), gkn433.
    by Hilda David-Eden, Yael Mandel-Gutfreund
    posted to analysis modelling network ribosome structure by neils on 2008-07-15 04:45:46 as **
  • Global analysis of protein phosphorylation in yeast
    Nature, Vol. 438, No. 7068., pp. 679-684.
    by Jason Ptacek, Geeta Devgan, Gregory Michaud, Heng Zhu, Xiaowei Zhu, Joseph Fasolo, Hong Guo, Ghil Jona, Ashton Breitkreutz, Richelle Sopko, Rhonda R Mccartney, Martin C Schmidt, Najma Rachidi, Soo-Jung Lee, Angie S Mah, Lihao Meng, Michael JR Stark, David F Stern, Claudio De Virgilio, Mike Tyers, Brenda Andrews, Mark Gerstein, Barry Schweitzer, Paul F Predki, Michael Snyder
    posted to analysis phosphorylation proteomics yeast by neils on 2008-07-12 13:04:47 as ** along with 6 people and 1 group tmmurali tuck balabu nickluscombe koller carlk EBI-regulation
  • Revisiting the Saccharomyces cerevisiae predicted ORFeome
    Genome Res. (2008)
    by Qian R Li, Anne R Carvunis, Haiyuan Yu, Jing, Quan Zhong, Nicolas Simonis, Stanley Tam, Tong Hao, Niels J Klitgord, Denis Dupuy, Danny Mou, Ilan Wapinski, Aviv Regev, David E Hill, Michael E Cusick, Marc Vidal
    posted to genomics orfs prediction yeast transcript orfan by neils on 2008-07-11 04:48:06 as **
  • Extracting sequence features to predict protein-DNA interactions: a comparative study
    Nucl. Acids Res., Vol. 36, No. 12. (1 July 2008), pp. 4137-4148.
    by Qing Zhou, Jun S Liu
    posted to bioinformatics interaction prediction protein-dna sequence by neils on 2008-07-11 00:31:23 as ** along with 1 person maximilianh
  • Comparative genomics supports a deep evolutionary origin for the large, four-module transcriptional mediator complex
    Nucl. Acids Res., Vol. 36, No. 12. (1 July 2008), pp. 3993-4008.
    by Henri-Marc Bourbon
    posted to comparative evolution genomics phylogeny transcription by neils on 2008-07-11 00:30:15 as **
  • A Mitochondrial Protein Compendium Elucidates Complex I Disease Biology
    Cell, Vol. 134, No. 1. (11 July 2008), pp. 112-123.
    by David J Pagliarini, Sarah E Calvo, Betty Chang, Sunil A Sheth, Scott B Vafai, Shao-En Ong, Geoffrey A Walford, Canny Sugiana, Avihu Boneh, William K Chen, David E Hill, Marc Vidal, James G Evans, David R Thorburn, Steven A Carr, Vamsi K Mootha
    posted to bioinformatics complex-i disease localisation mitochondria protein scl by neils on 2008-07-11 00:27:50 as ** along with 4 people brianb ptrobajo raiyar mdstobbe
  • Immunomodulatory Effects of Polar Lichens on the Function of Macrophages In Vitro.
    Marine biotechnology (New York, N.Y.) (9 July 2008)
    by Hye-Sook S Choi, Joung H Yim, Hong K Lee, Suhkneung Pyo
    posted to antarctic immunology lichen macrophage pathway phosphorylation by neils on 2008-07-11 00:20:06 as **
  • Structural Relationships Among the Ribosomal Stalk Proteins from the Three Domains of Life.
    Journal of molecular evolution (9 July 2008)
    by Przemysław Grela, Pau Bernadó, Dmitri Svergun, Jan Kwiatowski, Dariusz Abramczyk, Nikodem Grankowski, Marek Tchórzewski
    posted to evolution phylogeny ribosome structure protein by neils on 2008-07-11 00:18:55 as **
    • NB: Du kan sitere denne siden som: http://www.citeulike.org/user/neils/order/to_read

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