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neveaires library [60 articles]

Nye artikler sendt til neveaires bibliotek i prioritert rekkefølge .
  • Model-based variance-stabilizing transformation for Illumina microarray data
    Nucl. Acids Res. (4 January 2008), gkm1075.
    by Simon M Lin, Pan Du, Wolfgang Huber, Warren A Kibbe
    posted to illumina by neveaire on 2008-01-25 02:23:11 as ***** along with 2 people jyuh jfr
  • Biological function of unannotated transcription during the early development of Drosophila melanogaster
    Nature Genetics, Vol. 38, No. 10. (03 September 2006), pp. 1151-1158.
    by Robert J Manak, Sujit Dike, Victor Sementchenko, Philipp Kapranov, Frederic Biemar, Jeff Long, Jill Cheng, Ian Bell, Srinka Ghosh, Antonio Piccolboni, Thomas R Gingeras
  • Tiling DNA microarrays for fly genome cartography
    Nature Genetics, Vol. 38, No. 10., pp. 1101-1102.
    by Brian Oliver
  • How missing genes interact
    Nature Genetics, Vol. 39, No. 4., pp. 440-442.
    by Clifford Zeyl
    posted to epistasis by neveaire on 2008-01-08 02:53:53 as ****
  • A case study in genome-level fragment assembly
    Bioinformatics, Vol. 16, No. 6. (1 June 2000), pp. 494-500.
    by Ting Chen, Steven S Skiena
    posted to sequencing by neveaire on 2007-10-11 01:29:29 as ****
  • notes PolymiRTS Database: linking polymorphisms in microRNA target sites with complex traits
  • notes Microarray data normalization and transformation
    Nature Genetics
  • notes Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways
    Nature Genetics
    by Ben Lehner, Catriona Crombie, Julia Tischler, Angelo Fortunato, Andrew G Fraser1
  • RNA-mediated non-mendelian inheritance of an epigenetic change in the mouse
    Nature, Vol. 441, No. 7092., pp. 469-474.
    by Minoo Rassoulzadegan, Valã©rie Grandjean, Pierre Gounon, Stã©phane Vincent, Isabelle Gillot, Franã§ois Cuzin
  • Towards computing with proteins
    Proteins, Vol. 1, No. 63. (2006), 53.
  • notes Metagenomic Analysis of the Human Distal Gut Microbiome
    Science, Vol. 312, No. 5778. (2 June 2006), pp. 1355-1359.
    by Steven R Gill, Mihai Pop, Robert T Deboy, Paul B Eckburg, Peter J Turnbaugh, Buck S Samuel, Jeffrey I Gordon, David A Relman, Claire M Fraser-Liggett, Karen E Nelson
  • The Functional Genomics of Noncoding RNA
    Science, Vol. 309, No. 5740. (02 September 2005), pp. 1527-1528.
    by John S Mattick
  • notes Collegial decision making based on social amplification leads to optimal group formation
    PNAS, Vol. 103, No. 15. (11 April 2006), pp. 5835-5840.
    by Jean-Marc Ame, Jose Halloy, Colette Rivault, Claire Detrain, Jean L Deneubourg
  • Statistical issues in the analysis of Illumina data
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Mark Dunning, Nuno B Morais, Andy Lynch, Simon Tavare, Matthew Ritchie
  • Integrated transcriptional profiling and linkage analysis for identification of genes underlying disease
    Nature Genetics, Vol. 37, No. 3. (13 February 2005), pp. 243-253.
    by Norbert Hubner, Caroline A Wallace, Heike Zimdahl, Enrico Petretto, Herbert Schulz, Fiona Maciver, Michael Mueller, Oliver Hummel, Jan Monti, Vaclav Zidek, Alena Musilova, Vladimir Kren, Helen Causton, Laurence Game, Gabriele Born, Sabine Schmidt, Anita Müller, Stuart A Cook, Theodore W Kurtz, John Whittaker, Michal Pravenec, Timothy J Aitman
  • A rapid method for microarray cross platform comparisons using gene expression signatures.
    Mol Cell Probes (10 August 2006)
    by Chris Cheadle, Kevin G G Becker, Yoon S S Cho-Chung, Maria Nesterova, Tonya Watkins, William Wood, Vinayakumar Prabhu, Kathleen C C Barnes
  • How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different results.
    BMC Bioinformatics, Vol. 7 (2006)
    by FF Millenaar, J Okyere, ST May, M van Zanten, LA Voesenek, AJ Peeters
    posted to microarray by neveaire on 2008-02-08 01:56:53 as ** along with 4 people pure39 jfr ghattem waszak
  • Complete Chemical Synthesis, Assembly, and Cloning of a Mycoplasma genitalium Genome
    Science (24 January 2008), 1151721.
    by Daniel G Gibson, Gwynedd A Benders, Cynthia Andrews-Pfannkoch, Evgeniya A Denisova, Holly Baden-Tillson, Jayshree Zaveri, Timothy B Stockwell, Anushka Brownley, David W Thomas, Mikkel A Algire, Chuck Merryman, Lei Young, Vladimir N Noskov, John I Glass, Craig J Venter, Clyde A Hutchison, Hamilton O Smith
  • Microarray data analysis and mining approaches
    Brief Funct Genomic Proteomic (22 January 2008), elm034.
    by Francesca Cordero, Marco Botta, Raffaele A Calogero
    posted to illumina by neveaire on 2008-01-31 23:15:12 as ** along with 3 people fishtank jyuh jfr
  • Shotgun Protein Sequencing: Assembly of Peptide Tandem Mass Spectra from Mixtures of Modified Proteins.
    Mol Cell Proteomics, Vol. 6, No. 7. (July 2007), pp. 1123-1134.
    by Nuno Bandeira, Karl R R Clauser, Pavel A A Pevzner
    posted to bioinformatics ms proteomics by neveaire on 2008-01-17 06:49:17 as ** along with 2 people jyuh nedwards
  • A Primer on Python for Life Science Researchers
    PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e199.
    by Sebastian Bassi
    posted to programming by neveaire on 2007-12-13 01:12:44 as **
  • Network motifs: simple building blocks of complex networks.
    Science, Vol. 298, No. 5594. (25 October 2002), pp. 824-827.
  • Bayesian methods in bioinformatics and computational systems biology.
    Brief Bioinform (12 April 2007)
    by Darren J J Wilkinson
  • Inferring cellular networks using probabilistic graphical models.
    Science, Vol. 303, No. 5659. (6 February 2004), pp. 799-805.
  • Skip lists: a probabilistic alternative to balanced trees
    Commun. ACM, Vol. 33, No. 6. (June 1990), pp. 668-676.
    by William Pugh
    posted to algorithms by neveaire on 2007-10-24 02:40:17 as ** along with 2 people myui tumo
  • Facilitating genome navigation: survey sequencing and dense radiation-hybrid gene mapping
    Nat Rev Genet, Vol. 6, No. 8. (2005), pp. 643-648.
    by Christophe Hitte, Jennifer Madeoy, Ewen F Kirkness, Catherine Priat, Travis D Lorentzen, Fabrice Senger, Dan Thomas, Thomas Derrien, Christina Ramirez, Carol Scott, Gwenaelle Evanno, Barbara Pullar, Edouard Cadieu, Vinay Oza, Kristelle Lourgant, David B Jaffe, Sandrine Tacher, Stephane Dreano, Nadia Berkova, Catherine Andre, Panagiotis Deloukas, Claire Fraser, Kerstin Lindblad-Toh, Elaine A Ostrander, Francis Galibert
    posted to rh by neveaire on 2007-10-12 01:38:12 as **
  • The human disease network
    PNAS, Vol. 104, No. 21. (22 May 2007), pp. 8685-8690.
    by Kwang-Il Goh, Michael E Cusick, David Valle, Barton Childs, Marc Vidal, Albert-Laszlo Barabasi
  • Hierarchical Organization of Modularity in Metabolic Networks
    Science, Vol. 297, No. 5586. (30 August 2002), pp. 1551-1555.
    by E Ravasz, AL Somera, DA Mongru, ZN Oltvai, AL Barabasi
  • Estimating the Efficiency of Fish Cross-Species cDNA Microarray Hybridization
    Marine Biotechnology
    by Raphael Cohen, Vered Chalifa-Caspi, Timothy Williams, Meirav Auslander, Stephen George, James Chipman, Moshe Tom
  • Three methods for optimization of cross-laboratory and cross-platform microarray expression data
  • Genetics of global gene expression
    Nature Reviews Genetics, Vol. 7, No. 11., pp. 862-872.
    by Matthew V Rockman, Leonid Kruglyak
  • The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease.
    Science, Vol. 313, No. 5795. (29 September 2006), pp. 1929-1935.
    by J Lamb, ED Crawford, D Peck, JW Modell, IC Blat, MJ Wrobel, J Lerner, JP Brunet, A Subramanian, KN Ross, M Reich, H Hieronymus, G Wei, SA Armstrong, SJ Haggarty, PA Clemons, R Wei, SA Carr, ES Lander, TR Golub
  • notes Genome sequence, comparative analysis and haplotype structure of the domestic dog
    Nature, Vol. 438, No. 7069., pp. 803-819.
    by Kerstin Lindblad-Toh, Claire M Wade, Tarjei S Mikkelsen, Elinor K Karlsson, David B Jaffe, Michael Kamal, Michele Clamp, Jean L Chang, Edward J Kulbokas, Michael C Zody, Evan Mauceli, Xiaohui Xie, Matthew Breen, Robert K Wayne, Elaine A Ostrander, Chris P Ponting, Francis Galibert, Douglas R Smith, Pieter J Dejong, Ewen Kirkness, Pablo Alvarez, Tara Biagi, William Brockman, Jonathan Butler, Chee-Wye Chin, April Cook, James Cuff, Mark J Daly, David Decaprio, Sante Gnerre, Manfred Grabherr, Manolis Kellis, Michael Kleber, Carolyne Bardeleben, Leo Goodstadt, Andreas Heger, Christophe Hitte, Lisa Kim, Klaus-Peter Koepfli, Heidi G Parker, John P Pollinger, Stephen MJ Searle, Nathan B Sutter, Rachael Thomas, Caleb Webber, Eric S Lander
  • Why Are There Still Over 1000 Uncharacterized Yeast Genes?
    Genetics, Vol. 176, No. 1. (1 May 2007), pp. 7-14.
    by Lourdes Pena-Castillo, Timothy R Hughes
  • Haplotype Block Structure and Its Applications to Association Studies: Power and Study Designs
  • The success (or not) of HUGO nomenclature
  • Use of Artificial Genomes in Assessing Methods for Atypical Gene Detection.
    PLoS Comput Biol, Vol. 1, No. 6. (11 November 2005)
    by Rajeev K K Azad, Jeffrey G G Lawrence
  • Mitochondrial DNA and human evolution.
    Nature, Vol. 325, No. 6099. (7 1987), pp. 31-36.
    by RL Cann, M Stoneking, AC Wilson
  • A tutorial on hidden Markov models and selected applications in speech recognition
    Proceedings of the IEEE, Vol. 77, No. 2. (1989), pp. 257-286.
    by LR Rabiner
  • Inferring genetic networks and identifying compound mode of action via expression profiling.
    Science, Vol. 301, No. 5629. (4 July 2003), pp. 102-105.
  • notes L2L: a simple tool for discovering the hidden significance in microarray expression data
    Genome Biology, Vol. 6, No. 9. (2005)
    by John Newman, Alan Weiner
  • L2L: a simple tool for discovering the hidden significance in microarray expression data
    Genome Biology
    by John
  • A genomic code for nucleosome positioning
    Nature, Vol. 442, No. 7104. (19 July 2006), pp. 772-778.
    by Eran Segal, Yvonne Fondufe-Mittendorf, Lingyi Chen, Annchristine Thåström, Yair Field, Irene K Moore, Ji-Ping Z Wang, Jonathan Widom
  • Knowledge-based analysis of microarray gene expression data by using support vector machines
    PNAS, Vol. 97, No. 1. (4 January 2000), pp. 262-267.
    by Michael P Brown, William N Grundy, David Lin, Nello Cristianini, Charles W Sugnet, Terrence S Furey, Manuel Ares, David Haussler
  • Assessing computational tools for the discovery of transcription factor binding sites
    Nature Biotechnology, Vol. 23, No. 1. (06 January 2005), pp. 137-144.
    by Martin Tompa, Nan Li, Timothy L Bailey, George M Church, Bart D De Moor, Eleazar Eskin, Alexander V Favorov, Martin C Frith, Yutao Fu, James J Kent, Vsevolod J Makeev, Andrei A Mironov, William S Noble, Giulio Pavesi, Graziano Pesole, Mireille Régnier, Nicolas Simonis, Saurabh Sinha, Gert Thijs, Jacques v van Helden, Mathias Vandenbogaert, Zhiping Weng, Christopher Workman, Chun Ye, Zhou Zhu
  • miRNA supplement
    Nature Genetics
  • Genomic signatures to guide the use of chemotherapeutics - Nature Medicine
    Nature Medicine
  • An autonomous molecular computer for logical control of gene expression.
    Nature, Vol. 429, No. 6990. (27 May 2004), pp. 423-429.
    by Y Benenson, B Gil, U Ben-Dor, R Adar, E Shapiro
  • A Gene-Coexpression Network for Global Discovery of Conserved Genetic Modules
    Science, Vol. 302, No. 5643. (10 October 2003), pp. 249-255.
    by Joshua M Stuart, Eran Segal, Daphne Koller, Stuart K Kim
  • notes Biological imaging by soft x-ray diffraction microscopy
    PNAS, Vol. 102, No. 43. (25 October 2005), pp. 15343-15346.
    by David Shapiro, Pierre Thibault, Tobias Beetz, Veit Elser, Malcolm Howells, Chris Jacobsen, Janos Kirz, Enju Lima, Huijie Miao, Aaron M Neiman, David Sayre
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