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nicholasflanns library [99 articles]

Nye artikler sendt til nicholasflanns bibliotek.
  • Multiobjective Optimization in Bioinformatics and Computational Biology
    IEEE/ACM Trans. Comput. Biol. Bioinformatics, Vol. 4, No. 2. (April 2007), pp. 279-292.
    by Julia Handl, Douglas B Kell, Joshua Knowles
    posted to no-tag by nicholasflann on 2008-09-04 00:43:29 as **** along with 2 people bigbossman alanrw
  • Tumor Angiogenesis
    N Engl J Med, Vol. 358, No. 19. (8 May 2008), pp. 2039-2049.
    by Robert S Kerbel
    posted to angiogenesis cancer by nicholasflann on 2008-08-20 20:55:10 as ** along with 1 person jyuh
  • Computational Model of Vascular Endothelial Growth Factor Spatial Distribution in Muscle and Pro-Angiogenic Cell Therapy
    PLoS Comput Biol, Vol. 2, No. 9. (2006), e127.
    by Mac, James W Ji, Aleksander S Popel
    posted to no-tag by nicholasflann on 2008-08-20 20:48:13 as **
  • Cell elongation is key to in silico replication of in vitro vasculogenesis and subsequent remodeling
    Developmental Biology, Vol. 289, No. 1. (1 January 2006), pp. 44-54.
    by Roeland M Merks, Sergey V Brodsky, Michael S Goligorksy, Stuart A Newman, James A Glazier
    posted to angiogenesis cancer by nicholasflann on 2008-08-20 20:13:58 as ** along with 2 people lisa1 Doug
  • Alternative Vascularization Mechanisms in Cancer - Pathology and Therapeutic Implications
    American Journal of Pathology, Vol. 170, No. 1. (1 January 2007), pp. 1-15.
    by Dome, Balazs, Hendrix, JC Mary, Paku, Sandor, Tovari, Jozsef, Timar, Jozsef
    posted to angiogenesis cancer by nicholasflann on 2008-08-20 20:08:34 as *****
  • Angiogenesisunderstanding the mathematical challenge
    Angiogenesis (September 2006), pp. 127-138.
    by Pamela Jones, Brian Sleeman
    posted to angiogenesis cancer by nicholasflann on 2008-08-20 19:51:38 as *****
  • Building skeleton models via 3-D medial surface/axis thinning algorithms
    CVGIP: Graph. Models Image Process., Vol. 56, No. 6. (November 1994), pp. 462-478.
    by Ta-Chih Lee, Rangasami L Kashyap, Chong-Nam Chu
    posted to algorithm by nicholasflann on 2008-07-29 20:33:24 as **
  • Cell-Oriented Modeling of In Vitro Capillary Development
    Cellular Automata (2004), pp. 425-434.
    by Roeland M Merks, Stuart A Newman, James A Glazier
    posted to angiogenesis cancer cpm by nicholasflann on 2008-07-29 19:02:03 as *****
  • Fractal parameters and vascular networks: facts & artifacts
    Theoretical Biology and Medical Modelling, Vol. 5 (17 July 2008), 12.
    by Daniele Mancardi, Gianfranco Varetto, Enrico Bucci, Fabrizio Maniero, Caterina Guiot
    posted to angiogenesis by nicholasflann on 2008-07-21 23:52:30 as *****
  • Morpheus Unbound: Reimagining the Morphogen Gradient
    Cell, Vol. 128, No. 2. (26 January 2007), pp. 245-256.
    by Arthur D Lander
    posted to angiogenesis cancer grn by nicholasflann on 2008-07-21 22:55:32 as ***** along with 2 people and 1 group brant shh EisenLab
  • Topography of Extracellular Matrix Mediates Vascular Morphogenesis and Migration Speeds
    BioPhysical Journal
    by Bauer Amy, Jackson Trachette, Jiang Yi
    posted to cancer ecm by nicholasflann on 2008-07-18 20:09:08 as *****
  • Trends in the Leading Causes of Death in the United States, 1970-2002
    JAMA, Vol. 294, No. 10. (2005), pp. 1255-1259.
    by A Jemal, E Ward, Y Hao, M Thun
    posted to file-import-08-05-21 by nicholasflann on 2008-05-21 18:58:16 as **
  • Parallel Programming: Techniques and Applications Using Networked Workstations and Parallel Computers
    (2005)
    by B Wilkinson, A Michael
    posted to file-import-08-05-21 by nicholasflann on 2008-05-21 18:54:22 as **
  • Parallel Monte Carlo simulations
    Phys. Rev. E, Vol. 51, No. 2. (Feb 1995), pp. 1560-1568.
    by K Esselink, LDJC Loyens, B Smit
    posted to file-import-08-05-21 by nicholasflann on 2008-05-21 18:53:13 as **
  • Vascular endothelial cell growth factor (VEGF), an emerging target for cancer chemotherapy.
    Current medicinal chemistry. Anti-cancer agents, Vol. 3, No. 2. (March 2003), pp. 95-117.
    by S Shinkaruk, M Bayle, G Laïn, G Déléris
    posted to angiogenesis cancer by nicholasflann on 2008-04-05 18:25:41 as ****
  • Angiogenesis in cancer and other diseases.
    Nature, Vol. 407, No. 6801. (14 September 2000), pp. 249-257.
    by P Carmeliet, RK Jain
    posted to angiogenesis cancer by nicholasflann on 2008-04-05 18:24:29 as **** along with 3 people Alan anitabanerji 7ofAnn
  • Antiangiogenic Therapy for Cancer: An Update.
    The Cancer Journal, Vol. 13, No. 6. (November 2007), pp. 345-348.
    by F Shojaei, N Ferrara
    edited by Abstract:
    posted to angiogenesis cancer by nicholasflann on 2008-04-05 11:51:27 as ****
  • Dll4 signalling through Notch1 regulates formation of tip cells during angiogenesis
    Nature (28 January 2007)
    by Mats Hellström, Li-Kun Phng, Jennifer J Hofmann, Elisabet Wallgard, Leigh Coultas, Per Lindblom, Jackelyn Alva, Ann-Katrin Nilsson, Linda Karlsson, Nicholas Gaiano, Keejung Yoon, Janet Rossant, Luisa M Iruela-Arispe, Mattias Kalén, Holger Gerhardt, Christer Betsholtz
    posted to angiogenesis cancer grn by nicholasflann on 2008-03-27 19:07:19 as ****
  • Diffusion Coefficient of Oxygen through Tissues
    Nature, Vol. 215, No. 5106. (1967), pp. 1173-1174.
    by JDB Macdougall, M Mccabe
    posted to angiogenesis cancer by nicholasflann on 2008-03-04 18:04:34 as **
  • Moving Forward Moving Backward: Directional Sorting of Chemotactic Cells due to Size and Adhesion Differences
    PLoS Computational Biology, Vol. 2, No. 6. (1 June 2006), e56.
    by J K$ä$fer, P Hogeweg, AF Mar$é$e
    posted to cpm by nicholasflann on 2008-02-29 23:16:56 as ** along with 1 person LuLi
  • The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models.
    Bioinformatics, Vol. 19, No. 4. (1 March 2003), pp. 524-531.
    by M Hucka, A Finney, HM Sauro, H Bolouri, JC Doyle, H Kitano, AP Arkin, BJ Bornstein, D Bray, A Cornish-Bowden, AA Cuellar, S Dronov, ED Gilles, M Ginkel, V Gor, II Goryanin, WJ Hedley, TC Hodgman, JH Hofmeyr, PJ Hunter, NS Juty, JL Kasberger, A Kremling, U Kummer, N Le Novère, LM Loew, D Lucio, P Mendes, E Minch, ED Mjolsness, Y Nakayama, MR Nelson, PF Nielsen, T Sakurada, JC Schaff, BE Shapiro, TS Shimizu, HD Spence, J Stelling, K Takahashi, M Tomita, J Wagner, J Wang,
    posted to synthetic by nicholasflann on 2008-02-29 17:26:02 as ** along with 12 people and 1 group subhacom irenas husain easr balajis wnpx jbchang lenov pmendes csanford AlexanderPico dullhunk dbk-lab
  • Current approaches to gene regulatory network modelling.
    BMC Bioinformatics, Vol. 8 Suppl 6 (2007)
    by T Schlitt, A Brazma
    posted to grn synthetic by nicholasflann on 2008-02-29 15:31:04 as ***** along with 4 people kengg shigepong ramakris bertelsen
  • Advances in synthetic biology: on the path from prototypes to applications.
    Curr Opin Biotechnol (11 July 2005)
    by Ryan McDaniel, Ron Weiss
    posted to synthetic by nicholasflann on 2008-02-26 00:28:37 as ** along with 7 people rklancer monod hsr johncumbers hanansh kevinchannon dansullivanblk
  • Ambiguities in Incremental Line Rastering
    Computer Graphics and Applications, IEEE, Vol. 7, No. 5. (1987), pp. 31-43.
    by JE Bresenham
    posted to algorithm ecm by nicholasflann on 2008-02-25 22:43:42 as **
  • Self-Enhanced Ligand Degradation Underlies Robustness of Morphogen Gradients
    Developmental Cell, Vol. 5, No. 4. (October 2003), pp. 635-646.
    by Avigdor Eldar, Dalia Rosin, Ben-Zion Shilo, Naama Barkai
    posted to grn by nicholasflann on 2008-02-20 18:20:19 as **
  • Robustness of the BMP morphogen gradient in Drosophila embryonic patterning.
    Nature, Vol. 419, No. 6904. (19 September 2002), pp. 304-308.
    by A Eldar, R Dorfman, D Weiss, H Ashe, BZ Shilo, N Barkai
    posted to grn by nicholasflann on 2008-02-20 18:18:18 as ** along with 3 people and 1 group rklancer adepace shh EisenLab
  • The sonic hedgehog signaling system as a bistable genetic switch.
    Biophys J, Vol. 86, No. 5. (May 2004), pp. 2748-2757.
    by K Lai, MJ Robertson, DV Schaffer
    posted to grn by nicholasflann on 2008-02-20 18:10:19 as ** along with 1 person shh
  • Signal dynamics in Sonic hedgehog tissue patterning
    Development, Vol. 133, No. 5. (1 March 2006), pp. 889-900.
    by Krishanu Saha, David V Schaffer
    posted to grn by nicholasflann on 2008-02-20 17:23:40 as ** along with 1 person shh
  • A Calculus of Purpose
    PLoS Biology, Vol. 2, No. 6. (1 June 2004), e164.
    by Arthur D Lander
    posted to grn by nicholasflann on 2008-02-20 17:16:56 as **
  • Designing biological systems
    Genes and Development, Vol. 21 (2007), pp. 242-254.
    by DA Drubin, JC Way, PA Silver
    posted to synthetic by nicholasflann on 2008-02-15 18:19:58 as **
  • Hybrid semi-parametric mathematical systems: Bridging the gap between systems biology and process engineering
    Journal of Biotechnology, Vol. 132, No. 4. (1 December 2007), pp. 418-425.
    by Ana P Teixeira, Nuno Carinhas, Joao M Dias, Pedro Cruz, Paula M Alves, Manuel J Carrondo, Rui Oliveira
    posted to synthetic by nicholasflann on 2008-02-15 18:07:35 as **
  • Models for synthetic biology
    BMC Systems Biology, Vol. 1, No. 1. (2007)
    by Yiannis Kaznessis
    posted to synthetic by nicholasflann on 2008-02-15 18:04:01 as ** along with 1 person lafras
  • Synthetic biology: new engineering rules for an emerging discipline
    Mol Syst Biol, Vol. 2 (2006), pp. msb4100073-E1-msb4100073-E14.
    by Ernesto Andrianantoandro, Subhayu Basu, David K Karig, Ron Weiss
    posted to synthetic by nicholasflann on 2008-02-15 17:51:27 as ** along with 9 people sharatjv johncumbers mmt margaritis jrbanga sujaikumar jbchang kevinchannon grahamc
  • Nano-enabled synthetic biology
    Mol Syst Biol, Vol. 3 (10 July 2007)
    by Mitchel J Doktycz, Michael L Simpson
    posted to synthetic by nicholasflann on 2008-02-15 17:48:32 as ** along with 3 people and 1 group johncumbers grahamc Quarem ParkinsonLab_at_MaRS
  • Mathematical modelling of flow through vascular networks: implications for tumour-induced angiogenesis and chemotherapy strategies.
    Bull Math Biol, Vol. 64, No. 4. (July 2002), pp. 673-702.
    by SR McDougall, AR Anderson, MA Chaplain, JA Sherratt
    posted to cancer by nicholasflann on 2008-02-14 03:18:32 as **
  • Computer simulation of glioma growth and morphology
    NeuroImage, Vol. 37, No. Supplement 1. (2007), pp. S59-S70.
    by Hermann B Frieboes, John S Lowengrub, S Wise, X Zheng, Paul Macklin, Elaine L Bearer, Vittorio Cristini
    posted to angiogenesis cancer by nicholasflann on 2008-02-14 03:09:16 as ***** along with 1 person blloyd
  • Mathematical modelling of dynamic adaptive tumour-induced angiogenesis: clinical implications and therapeutic targeting strategies.
    J Theor Biol, Vol. 241, No. 3. (7 August 2006), pp. 564-589.
    by SR McDougall, AR Anderson, MA Chaplain
    posted to cancer by nicholasflann on 2008-02-14 03:06:50 as **
  • Mathematical Modeling of Tumor-Induced Angiogenesis.
    Annu Rev Biomed Eng (17 April 2006)
    by M A J A Chaplain, S R R McDougall, A R A R Anderson
    posted to cancer by nicholasflann on 2008-02-14 03:04:59 as **
  • A Multiscale, Cell-Based Framework for Modeling Cancer Development
    Computational Science – ICCS 2007 (2007), pp. 770-777.
    by Yi Jiang
    posted to cancer by nicholasflann on 2008-02-14 00:53:19 as ****
  • Adhesion between cells, diffusion of growth factors, and elasticity of the AER produce the paddle shape of the chick limb
    Physica A: Statistical and Theoretical Physics, Vol. 373 (1 January 2007), pp. 521-532.
    by Nikodem J Poplawski, Maciej Swat, Scott, James A Glazier
    posted to cpm by nicholasflann on 2008-02-14 00:46:06 as *** along with 1 person Doug
  • A parallel implementation of the Cellular Potts Model for simulation of cell-based morphogenesis
    Computer Physics Communications, Vol. 176, No. 11-12. (June 2007), pp. 670-681.
    by Nan Chen, James A Glazier, Jesus A Izaguirre, Mark S Alber
    posted to cpm by nicholasflann on 2008-02-14 00:44:36 as **** along with 2 people gokhan Doug
  • Stochastic simulation of benign avascular tumour growth using the Potts model
    Mathematical and Computer Modelling, Vol. 30, No. 5-6. (September 1999), pp. 183-198.
    by EL Stott, NF Britton, JA Glazier, M Zajac
    posted to no-tag by nicholasflann on 2008-02-14 00:42:16 as ****
  • Intercellular Adhesion and Cancer Invasion: A Discrete Simulation Using the Extended Potts Model
    Journal of Theoretical Biology, Vol. 216, No. 1. (7 May 2002), pp. 85-100.
    by S Turner, JA Sherratt
    posted to cancer by nicholasflann on 2008-02-14 00:40:25 as read
  • A Cell-Based Model Exhibiting Branching and Anastomosis during Tumor-Induced Angiogenesis
    Biophys. J., Vol. 92, No. 9. (1 May 2007), pp. 3105-3121.
    by AL Bauer, TL Jackson, Y Jiang
    posted to cancer by nicholasflann on 2008-02-10 20:51:41 as *****
  • Blood flow in microvascular networks. Experiments and simulation
    Circ Res, Vol. 67, No. 4. (1 October 1990), pp. 826-834.
    by AR Pries, TW Secomb, P Gaehtgens, JF Gross
    posted to cancer by nicholasflann on 2008-02-04 23:44:10 as **
  • Quantitative Assessment of Angiogenesis and Tumor Vessel Architecture by Computer-Assisted Digital Image Analysis: Effects of VEGF-Toxin Conjugate on Tumor Microvessel Density
    Microvascular Research, Vol. 59, No. 3. (May 2000), pp. 368-376.
    by R Wild, S Ramakrishnan, J Sedgewick, AW Griffioen
    posted to no-tag by nicholasflann on 2008-02-04 23:32:38 as **
  • Regular mosaic pattern development: A study of the interplay between lateral inhibition, apoptosis and differential adhesion
    Theoretical Biology and Medical Modelling, Vol. 4 (31 October 2007), 43.
    by Gregory J Podgorski, Mayank Bansal, Nicholas S Flann
    posted to no-tag by nicholasflann on 2008-01-24 20:50:51 as **
  • CompuCell, a multi-model framework for simulation of morphogenesis.
    Bioinformatics, Vol. 20, No. 7. (1 May 2004), pp. 1129-1137.
    by JA Izaguirre, R Chaturvedi, C Huang, T Cickovski, J Coffland, G Thomas, G Forgacs, M Alber, G Hentschel, SA Newman, JA Glazier
    posted to no-tag by nicholasflann on 2008-01-24 20:48:59 as ** along with 3 people chrn balicea Doug
  • A mathematical model of venous neointimal hyperplasia formation
    Theoretical Biology and Medical Modelling, Vol. 5 (23 January 2008), 2.
    by Paula Budu-Grajdeanu, Richard C Schugart, Avner Friedman, Christopher Valentine, Anil K Agarwal, Brad H Rovin
    posted to ecm by nicholasflann on 2008-01-24 20:01:44 as **
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