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tharris' library [87 articles]

Nye artikler sendt til tharris' bibliotek.
  • Towards a cyberinfrastructure for the biological sciences: progress, visions and challenges
    Nat Rev Genet, Vol. 9, No. 9. (2008), pp. 678-688.
    by Lincoln D Stein
    posted to bioinformatics infrastructure review by tharris on 2008-08-19 15:09:51 as ** along with 16 people and 4 groups carolh12 ilya alaninmcr druvus srp33 dullhunk stajich mrochman dansullivanblk neils jandot GustavoLacerda jago fgibson thomaskelder sjcockell Berkeley Mycology Global_health_enterprise_architecture Knowledge_Economy_Reform kpa-resources
  • Visualizing Data
    (18 December 2007)
    by Ben Fry
    posted to books inspirational reference visualization by tharris on 2008-08-02 14:36:42 as ** along with 1 person ianturton
  • RESTful Web Services
    (08 May 2007)
    by Leonard Richardson, Sam Ruby
    posted to books reference rest webdesign webservices by tharris on 2008-08-02 14:34:56 as ** along with 7 people and 2 groups jyuh dullhunk gunv ket erisu edvin jasmithoffice Bioinformatics Social Web
  • Programming Collective Intelligence: Building Smart Web 2.0 Applications
    (16 August 2007)
    by Toby Segaran
    posted to books reference socialmedia web20 webdesign by tharris on 2008-08-02 14:34:09 as ** along with 11 people and 1 group ianturton tdrycker G-J gunv koles mircea dquercia patrickhoefler sjc fly51fly pthimon Catalysts Bookshelf
  • High Performance Web Sites: Essential Knowledge for Front-End Engineers
    (11 September 2007)
    by Steve Souders
    posted to architecture books design frontend performance reference scalability webdesign by tharris on 2008-08-02 14:33:18 as **
  • WikiPathways: Pathway Editing for the People
    PLoS Biology, Vol. 6, No. 7. (1 July 2008), e184.
    by Alexander R Pico, Thomas Kelder, Martijn P van Iersel, Kristina Hanspers, Bruce R Conklin, Chris Evelo
    posted to community database pathways social wiki by tharris on 2008-08-02 14:30:51 as ** along with 10 people and 2 groups cerami AlexanderPico thomaskelder iBartomeus renatomilani ajaymalik jarredmccaffrey laurianw dullhunk amarois ConklinLab behavior_flexibility
  • Seeking a New Biology through Text Mining
    Cell, Vol. 134, No. 1. (11 July 2008), pp. 9-13.
    by Andrey Rzhetsky, Michael Seringhaus, Mark Gerstein
    posted to bioinformatics textmining by tharris on 2008-08-02 14:29:03 as ** along with 7 people yas icq242500260 pzoot jyuh bootsy fgibson dullhunk
  • Interoperability of Biodiversity Databases: Biodiversity Information on Every Desktop
    Science, Vol. 289, No. 5488. (29 September 2000), pp. 2312-2314.
    by James L Edwards, Meredith A Lane, Ebbe S Nielsen
    posted to biodiversity bioinformatics databases interoperability by tharris on 2008-07-31 00:54:17 as ** along with 1 person phig
  • Use of shotgun proteomics for the identification, confirmation, and correction of C. elegans gene annotations.
    Genome research (24 July 2008)
    by Gennifer E E Merrihew, Colleen Davis, Brent Ewing, Gary Williams, Lukas Kall, Barbara E E Frewen, William Stafford S Noble, Phil Green, James H H Thomas, Michael J J Maccoss
    posted to confirmation elegans genemodels proteomics by tharris on 2008-07-31 00:53:11 as ***
  • A Gene Wiki for Community Annotation of Gene Function
    PLoS Biology, Vol. 6, No. 7. (1 July 2008), e175.
    by Jon W Huss, Camilo Orozco, James Goodale, Chunlei Wu, Serge Batalov, Tim J Vickers, Faramarz Valafar, Andrew I Su
    posted to community communityannotation social wiki by tharris on 2008-07-08 16:55:37 as ** along with 14 people and 2 groups druvus stajich dullhunk thomaskelder sjc inesdesantiago kintoki zwang ChrisEvelo reyez kristina GMTurner barriot jyuh Berkeley Mycology VisionLab
  • Life Sciences and the web: a new era for collaboration
    Mol Syst Biol, Vol. 4 (1 July 2008)
    by Jonathan A Sagotsky, Le Zhang, Zhihui Wang, Sean Martin, Thomas S Deisboeck
    posted to semanticweb socialweb web20 by tharris on 2008-07-08 16:06:46 as ** along with 6 people CameronNeylon reyez neils dullhunk renatomilani hpiwowar
  • The multiple gene duplication problem revisited.
    Bioinformatics (Oxford, England), Vol. 24, No. 13. (1 July 2008)
    by MS Bansal, O Eulenstein
    posted to bioinformatics geneduplication methods by tharris on 2008-07-08 16:05:31 as ** along with 2 people and 1 group bpcusack stajich Berkeley Mycology
  • The effect of "open access" on citation impact: An analysis of ArXiv's condensed matter section
    Journal of the American Society for Information Science and Technology, Vol. 58, No. 13. (2007), pp. 2047-2054.
    by Henk F Moed
    posted to citation impact openaccess by tharris on 2008-07-06 02:19:21 as ** along with 1 person dullhunk
  • What drives content tagging: the case of photos on Flickr
    (2008), pp. 1097-1100.
    by Oded Nov, Mor Naaman, Chen Ye
    posted to classification facetedcategorization tagging by tharris on 2008-07-06 02:18:00 as ** along with 7 people and 4 groups Hoenikker acslab sabunome azollers brusilovsky krisl rbudiu ACS social_navigation Social Web UX research updates
  • Assembly of Viral Metagenomes from Yellowstone Hot Springs
    Appl. Environ. Microbiol., Vol. 74, No. 13. (1 July 2008), pp. 4164-4174.
    by Thomas Schoenfeld, Melodee Patterson, Paul M Richardson, Eric K Wommack, Mark Young, David Mead
    posted to metagenomics mybackyard thermophiles viral yellowstone by tharris on 2008-07-06 02:17:04 as ** along with 2 people and 1 group stajich skato_toyaku Berkeley Mycology
  • Ten Simple Rules for Organizing a Scientific Meeting
    PLoS Comput Biol, Vol. 4, No. 6. (27 June 2008), e1000080.
    by Manuel Corpas, Nils Gehlenborg, Sarath C Janga, Philip E Bourne
    posted to management meetings organization pm by tharris on 2008-07-06 02:16:14 as ** along with 11 people and 2 groups aramesh2 Bendewhurst kristgy dullhunk balicea Schmidtc rcrane A_Olympia sci91078 dbikard champak logics of knowledge Centre de Recherches Interdisciplinaires
  • The EXACT description of biomedical protocols
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i295-303.
    by Larisa N Soldatova, Wayne Aubrey, Ross D King, Amanda Clare
    posted to ontologies ontology protocols by tharris on 2008-07-06 02:15:28 as ** along with 1 person dullhunk
  • Sharing detailed research data is associated with increased citation rate.
    PLoS ONE, Vol. 2, No. 3. (2007)
    by HA Piwowar, RS Day, DB Fridsma
    posted to citation impact openaccess by tharris on 2008-07-06 02:12:55 as ** along with 3 people hpiwowar dullhunk jfr
  • Ontologies are us: A unified model of social networks and semantics
    Web Semantics: Science, Services and Agents on the World Wide Web, Vol. 5, No. 1. (March 2007), pp. 5-15.
    by Peter Mika
    posted to emergentproperties folksonomy semantics socialbookmarking tagging by tharris on 2008-06-21 19:00:49 as ** along with 9 people and 2 groups pajoma dullhunk krisl fabianabel azygmunt searchy pprett hudafarhan rrbarb AGH-IISG musil
  • Emergent Semantics from Folksonomies: A Quantitative Study
    Journal on Data Semantics VI (2006), pp. 168-186.
    by Lei Zhang, Xian Wu, Yong Yu
    posted to emergentproperties folksonomy socialbookmarking socialweb tagging by tharris on 2008-06-21 18:59:30 as ** along with 7 people dongpo adamsi cherhan djsaab bouvin wangyiding professeur
  • The Language of Folksonomies: What Tags Reveal About User Classification
    Natural Language Processing and Information Systems (2006), pp. 58-69.
    by Csaba Veres
    posted to folksonomy socialbookmarking socialweb tagging tags by tharris on 2008-06-21 18:58:34 as ** along with 29 people and 2 groups schaal meikipp LexUT zflavio mook3000 bangb AlisonBabeu phutags hudafarhan alkal brianh abellogin Tronhus intrect ket renata adamsi plawton55 sabunome wangyiding fmarquesfilho azollers fryanpan crankylibrarian KHAL0006 enekofb rrbarb KOKI0001 PatParslow Social Web MeAggregator
  • Tagging, Folksonomy & Co - Renaissance of Manual Indexing?
    (26 Jan 2007)
    by Jakob Voss
    posted to categorization classification folksonomy semanticweb socialweb tagging tags by tharris on 2008-06-21 18:57:48 as ** along with 32 people and 4 groups A_Olympia pdlug creswick takeha-e mielniczuk djsaab Hoenikker ianturton pchampin dbenz meiersi mattlandau millamilla mook3000 bangb abonchen hanshee sjonvanthof anansi jryall-tags slklug qili nonsenz Tronhus wartaalman shaoke sabunome Torsten_Holmer ctreude rrbarb teddyyo Elycha Philosophy_of_Information Blog_and_Wiki_Research Social Web Social Tagging
  • GMODWeb: a web framework for the generic model organism database
    Genome Biology, Vol. 9, No. 6. (2008)
    by Brian O'Connor, Allen Day, Scott Cain, Olivier Arnaiz, Linda Sperling, Lincoln Stein
    posted to bioinformatics framework gmod opensource turnkey by tharris on 2008-06-21 01:26:34 as ** along with 4 people neils dullhunk jyuh jamselem
  • Helminth infections: the great neglected tropical diseases.
    The Journal of clinical investigation, Vol. 118, No. 4. (1 April 2008), pp. 1311-1321.
    by Peter J J Hotez, Paul J J Brindley, Jeffrey M M Bethony, Charles H H King, Edward J J Pearce, Julie Jacobson
    posted to helminth infections review tropicaldisease by tharris on 2008-06-20 20:40:00 as **** along with 1 person jyuh
  • Life-Cycle and Genome of OtV5, a Large DNA Virus of the Pelagic Marine Unicellular Green Alga Ostreococcus tauri
    PLoS ONE, Vol. 3, No. 5. (28 May 2008), e2250.
    by Evelyne Derelle, Conchita Ferraz, Marie-Line Escande, Sophie Eychenié, Richard Cooke, Gwenaël Piganeau, Yves Desdevises, Laure Bellec, Hervé Moreau, Nigel Grimsley
    posted to algae genome ostreococcus virus by tharris on 2008-06-20 20:32:12 as **
  • The folksonomy tag cloud: When is it useful?
    Journal of Information Science (31 May 2007), 0165551506078083.
    by James Sinclair, Michael Cardew-Hall
    posted to categorization design facetedcategorization folksonomy informationarchitecture tagcloud tagging tags visualization web20 by tharris on 2008-06-20 17:44:56 as ** along with 38 people and 5 groups rickl malenitah2 takeha-e jrsinclair weelassie ianturton suripi chirayu_kong bangb emayorga markymaypo bigenhoc elsantosneto sdw135 baxtron3000 abellogin qili olihelgi ffloeck nonsenz kawah adamsi cherhan hejibo bart3 johnkrutsch mook3000 djsaab dmeister Beriel jennieqs fryanpan krisl rbudiu wartaalman OriginalLurch PatParslow skasey Adaptive-Web LearningTechnologies ARTFL Social Web UX research updates
  • The Elements of Graphic Design: Space, Unity, Page Architecture, and Type
    (30 November 2002)
    by Alexander W White
    posted to books design graphicdesign inspirescape by tharris on 2008-06-20 17:43:17 as ** along with 2 people craniac cobotelar
  • Designing Interfaces : Patterns for Effective Interaction Design
    (21 November 2005)
    by Jenifer Tidwell
    posted to books design designpatterns ia informationarchitecture ui userexperience by tharris on 2008-06-20 17:42:05 as read along with 12 people and 6 groups rickl darcyduke ilya lukhnos pe3 cerkut digitaldust billpapa kklo flgeyer Torsten_Holmer aku8000 Wikipedia SFX-Verde-team-MITLibraries STS OpenVanilla localization contact-id
  • Protein homology detection by HMM-HMM comparison.
    Bioinformatics, Vol. 21, No. 7. (1 April 2005), pp. 951-960.
    by J Söding
    posted to hmm homology markov methods modeling by tharris on 2008-06-20 17:40:37 as ** along with 3 people chad_davis msierk granujilla
  • Introduction To Monte Carlo Algorithms
    (14 Nov 2006)
    by Werner Krauth
    posted to algorithms markov montecarlo by tharris on 2008-06-20 17:39:03 as ** along with 10 people ansobol stephensalomons penka dgront gane5h rabio ujarmatokyaniv softsimu mijam tertel
  • OBO Explorer: an editor for open biomedical ontologies in OWL
    Bioinformatics, Vol. 24, No. 3. (1 February 2008), pp. 443-444.
    by Stuart Aitken, Yin Chen, Jonathan Bard
    posted to methods obo ontology owl tools by tharris on 2008-06-20 17:06:27 as ** along with 3 people jyuh dullhunk lenov
  • OBO to OWL: a protege OWL tab to read/save OBO ontologies
    Bioinformatics, Vol. 23, No. 14. (1 July 2007), pp. 1868-1870.
    by Dilvan A Moreira, Mark A Musen
    posted to obo ontologies owl by tharris on 2008-06-20 17:05:35 as ** along with 5 people jyuh dullhunk leechuck RockHI lenov
  • Recommenders in a personalized, collaborative digital library environment
    Journal of Intelligent Information Systems, Vol. 28, No. 3. (June 2007), pp. 253-283.
    by Avancini, Henri, Candela, Leonardo, Straccia, Umberto
    posted to autocomplete design recommenders ui userinterface by tharris on 2008-06-20 17:03:12 as ** along with 1 person AlisonBabeu
  • From Pathways Databases to Network Models of Switching Behavior
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e152.
    by Baltazar D Aguda, Andrew B Goryachev
    posted to bioinformatics networks pathways by tharris on 2008-06-20 17:02:07 as ** along with 5 people and 1 group balicea cjeans GustavoLacerda sobolevnrm thomaskelder baker-group
  • A practical guide to the art of RNA gene prediction
    Brief Bioinform (4 May 2007), bbm011.
    by Irmtraud M Meyer
    posted to genefinding geneprediction methods rna by tharris on 2008-06-20 17:01:02 as ** along with 5 people penka wenhan GustavoLacerda xili03 xingxu
  • Figaro: a novel statistical method for vector sequence removal
    Bioinformatics, Vol. 24, No. 4. (15 February 2008), pp. 462-467.
    by James R White, Michael Roberts, James A Yorke, Mihai Pop
    posted to assembly bioinformatics genomeassembly methods repeats by tharris on 2008-06-20 17:00:11 as ** along with 2 people jyuh GustavoLacerda
  • Short read fragment assembly of bacterial genomes
    Genome Res., Vol. 18, No. 2. (1 February 2008), pp. 324-330.
    by Mark J Chaisson, Pavel A Pevzner
    posted to algorithm assembly genomeassembly shortread by tharris on 2008-06-20 16:59:31 as ** along with 5 people azazello GustavoLacerda dandaman caseybrown iris42
  • A machine-learning approach to combined evidence validation of genome assemblies
    Bioinformatics, Vol. 24, No. 6. (15 March 2008), pp. 744-750.
    by Jeong-Hyeon Choi, Sun Kim, Haixu Tang, Justen Andrews, Don G Gilbert, John K Colbourne
    posted to assembly assessment bioinformatics genome genomeanalysis by tharris on 2008-06-20 16:58:27 as ** along with 4 people GustavoLacerda Neeperando ttuechler bertelsen
  • What is principal component analysis?
    Nature Biotechnology, Vol. 26, No. 3., pp. 303-304.
    by Markus Ringnér
    posted to algorithm bioinformatics clustering methods by tharris on 2008-06-20 16:57:15 as ** along with 54 people and 3 groups Yanno jyuh operon barry baaic dullhunk Bevan_Weir zeji gareth massivemayhem zwang GustavoLacerda GeeSharpMinor bmaust zambujo mingzhi starz1010101 maralena wchannels sunhwan jennifermbui kdelavega zhouyu rsantana laharrin sobolevnrm fryanpan kengg rvosa dekay23 adacier hpaces waghsk rchauhan pavanghatty kristgy jfr bibay2004 xingxu quianominorleo abbie_riner craigwilson06 ashko markusd dayjm dimka i-stevenson chrissp100 ale mjoach HugoMarcelo jdiezperezj rrbarb Nici baker-group FAB-lab Bioinformatics
  • Empirical comparison of ab initio repeat finding programs
    Nucl. Acids Res. (20 February 2008), gkn064.
    by Surya Saha, Susan Bridges, Zenaida V Magbanua, Daniel G Peterson
    posted to comparison methods prediction repeat by tharris on 2008-06-20 16:56:25 as ** along with 5 people operon timflutre wisdom_love Ema GustavoLacerda
  • Mireval: a web tool for simple microRNA prediction in genome sequences
    Bioinformatics, Vol. 24, No. 11. (1 June 2008), pp. 1394-1396.
    by William Ritchie, Francois-Xavier Theodule, Daniel Gautheret
    posted to methods prediction rna by tharris on 2008-06-20 16:55:44 as ** along with 2 people GustavoLacerda jfr
  • The new paradigm of flow cell sequencing
    Genome Res., Vol. 18, No. 6. (1 June 2008), pp. 839-846.
    by Robert A Holt, Steven J Jones
    posted to flowcell genomesequencing methods by tharris on 2008-06-20 16:54:22 as ** along with 12 people and 1 group kintoki tmmurali stajich reyez lp2 GustavoLacerda balicea caseybrown dchughes hpaces serdarbozdag jfr Berkeley Mycology
  • Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species
    BMC Bioinformatics, Vol. 9 (13 June 2008), 278.
    by Oliver Keller, Florian Odronitz, Mario Stanke, Martin Kollmar, Stephan Waack
    posted to genefinding geneprediction genomics by tharris on 2008-06-20 16:53:40 as ** along with 1 person GustavoLacerda
  • Ensembl 2008.
    Nucleic Acids Res (13 November 2007)
    by P Flicek, B L L Aken, K Beal, B Ballester, M Caccamo, Y Chen, L Clarke, G Coates, F Cunningham, T Cutts, T Down, S C C Dyer, T Eyre, S Fitzgerald, J Fernandez-Banet, S Gräf, S Haider, M Hammond, R Holland, K L L Howe, K Howe, N Johnson, A Jenkinson, A Kähäri, D Keefe, F Kokocinski, E Kulesha, D Lawson, I Longden, K Megy, P Meidl, B Overduin, A Parker, B Pritchard, A Prlic, S Rice, D Rios, M Schuster, I Sealy, G Slater, D Smedley, G Spudich, S Trevanion, A J J Vilella, J Vogel, S White, M Wood, E Birney, T Cox, V Curwen, R Durbin, X M M Fernandez-Suarez, J Herrero, T J P J Hubbard, A Kasprzyk, G Proctor, J Smith, A Ureta-Vidal, S Searle
    posted to annotation database genome by tharris on 2008-06-20 16:50:44 as ** along with 8 people jyuh hpiwowar jandot flexer daed dullhunk skumagai janasont
  • Time to organize the bioinformatics resourceome.
    PLoS Comput Biol, Vol. 1, No. 7. (December 2005)
    by N Cannata, E Merelli, RB Altman
    posted to bioinformatics infrastructure pipedream by tharris on 2008-06-19 15:20:34 as ** along with 2 people and 1 group yas dullhunk T_lab
  • Genomic sequencing of single microbial cells from environmental samples.
    Current opinion in microbiology (10 June 2008)
    by Thomas Ishoey, Tanja Woyke, Ramunas Stepanauskas, Mark Novotny, Roger S S Lasken
    posted to genome genomesequencing mda methods microbiology sequencing by tharris on 2008-06-18 23:47:34 as **
  • UniPrime: a workflow-based platform for improved universal primer design
    Nucl. Acids Res., Vol. 36, No. 10. (1 June 2008), e56.
    by Michael Bekaert, Emma C Teeling
    posted to bioinformatics genbank primers tools by tharris on 2008-06-11 12:26:00 as ** along with 3 people and 1 group stajich jyuh niallhaslam Berkeley Mycology
  • The Emerging World of Wikis
    Science, Vol. 320, No. 5881. (6 June 2008), pp. 1289b-1290.
    by James C Hu, Rodolfo Aramayo, Dan Bolser, Tyrrell Conway, Christine G Elsik, Michael Gribskov, Thomas Kelder, Daisuke Kihara, Knight, Alexander R Pico, Deborah A Siegele, Barry L Wanner, Roy D Welch
    posted to collaboration community genbank wiki by tharris on 2008-06-11 12:20:38 as ** along with 13 people and 3 groups AlexanderPico davidmihalcik teachingaging barriot reyez dullhunk jago krisl CUL_Akbar heatherstaines martindale rrbarb ChrisEvelo Global_health_enterprise_architecture Knowledge_Economy_Reform Method_Engineering_Services
  • Helminthic infections.
    BMJ, Vol. 327, No. 7412. (23 August 2003), pp. 431-433.
    by S Awasthi, DA Bundy, L Savioli
    posted to infection parasitic parasitichelminths by tharris on 2008-06-08 19:24:02 as ** along with 1 person fisherp
  • Long PCR amplification of the entire mitochondrial genome from individual helminths for direct sequencing.
    Nat Protoc, Vol. 2, No. 10. (2007), pp. 2339-2344.
    by M Hu, AR Jex, BE Campbell, RB Gasser
    posted to helminths parasitic parasitichelminths pcr sequencing singleworm by tharris on 2008-06-08 19:22:55 as ** along with 1 person dchughes
    • NB: Du kan sitere denne siden som: http://www.citeulike.org/user/tharris

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