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zwangs library [537 articles]

Nye artikler sendt til zwangs bibliotek.
  • A genome-wide view of the spectrum of spontaneous mutations in yeast
    Vol. 105, No. 27. (2008), pp. 9272-9277.
    posted to yeast mutation genome-wide by zwang on 2008-07-09 08:18:41 as **
  • Dissecting direct reprogramming through integrative genomic analysis
    Nature (28 May 2008)
    by Tarjei S Mikkelsen, Jacob Hanna, Xiaolan Zhang, Manching Ku, Marius Wernig, Patrick Schorderet, Bradley E Bernstein, Rudolf Jaenisch, Eric S Lander, Alexander Meissner
    posted to interaction genome-wide by zwang on 2008-07-09 03:18:08 as ** along with 1 person djkt
  • Structural and Functional Studies of Nup107/Nup133 Interaction and Its Implications for the Architecture of the Nuclear Pore Complex
    Molecular Cell, Vol. 30, No. 6. (20 June 2008), pp. 721-731.
    by Thomas Boehmer, Sandra Jeudy, Ian C Berke, Thomas U Schwartz
    posted to structure interaction complex by zwang on 2008-07-07 04:18:01 as **
  • Structural Basis for the Cooperation of Hsp70 and Hsp110 Chaperones in Protein Folding
    Cell, Vol. 133, No. 6. (13 June 2008), pp. 1068-1079.
    by Sigrun Polier, Zdravko Dragovic, Ulrich F Hartl, Andreas Bracher
    posted to structure folding by zwang on 2008-07-07 04:17:04 as **
  • Importin-[beta]: Structural and Dynamic Determinants of a Molecular Spring
    Structure, Vol. 16, No. 6. (11 June 2008), pp. 906-915.
    by Ulrich Zachariae, Helmut Grubmüller
    posted to structure by zwang on 2008-07-07 04:14:27 as * along with 1 person choonpeng
  • A protocol for constructing gene targeting vectors: generating knockout mice for the cadherin family and beyond
    Nat. Protocols, Vol. 3, No. 6. (May 2008), pp. 1056-1076.
    by Sen Wu, Guoxin Ying, Qiang Wu, Mario R Capecchi
    posted to target protocol mammal by zwang on 2008-07-04 03:36:02 as ** along with 1 person dchughes
  • Footprinting protein-DNA complexes using the hydroxyl radical
    Nat. Protocols, Vol. 3, No. 6. (June 2008), pp. 1092-1100.
    by Swapan S Jain, Thomas D Tullius
    posted to protein dna complex by zwang on 2008-07-04 03:34:52 as **
  • Protein networks in disease
    Genome Res., Vol. 18, No. 4. (1 April 2008), pp. 644-652.
    by Trey Ideker, Roded Sharan
  • A generative, probabilistic model of local protein structure
    Proceedings of the National Academy of Sciences, Vol. 105, No. 26. (1 July 2008), pp. 8932-8937.
    by Wouter Boomsma, Kanti V Mardia, Charles C Taylor, Jesper Ferkinghoff-Borg, Anders Krogh, Thomas Hamelryck
    posted to structure protein modeling by zwang on 2008-07-02 11:49:14 as * along with 3 people mijam apaydin biehl
  • Evolutionary plasticity of genetic interaction networks
    Nat Genet, Vol. 40, No. 4. (April 2008), pp. 390-391.
    by Julia Tischler, Ben Lehner, Andrew G Fraser
  • Data and Theory Point to Mainly Additive Genetic Variance for Complex Traits
    PLoS Genet, Vol. 4, No. 2. (29 February 2008), e1000008.
    by William G Hill, Michael E Goddard, Peter M Visscher
    posted to evolution complex by zwang on 2008-07-01 11:01:10 as **
  • Using multiple templates to improve quality of homology models in automated homology modeling
    Protein Sci, Vol. 17, No. 6. (1 June 2008), pp. 990-1002.
    by Per Larsson, Bjorn Wallner, Erik Lindahl, Arne Elofsson
    posted to structure homologymodeling by zwang on 2008-07-01 08:51:22 as **
  • Kinetic barriers and the role of topology in Protein and RNA folding.
    Protein Sci (23 May 2008), ps.036319.108.
    by Tobin R Sosnick
    posted to rna protein interaction folding by zwang on 2008-07-01 08:50:56 as ***
  • Plasmid-chromosome shuffling for non-deletion alleles in yeast
    Nature Methods, Vol. 5, No. 2. (13 January 2008), pp. 167-169.
    by Zhiwei Huang, Richard S Sucgang, Yu-Yi Lin, Xiaomin Shi, Jef D Boeke, Xuewen Pan
    posted to yeast mutation gene by zwang on 2008-07-01 08:38:15 as *** along with 1 person csaveanu
  • Predicting protein function from domain content
    Bioinformatics (30 June 2008), btn312.
    by Kristoffer Forslund, Erik L Sonnhammer
    posted to protein prediction domain by zwang on 2008-07-01 02:44:42 as *** along with 1 person phoenixzxl
  • Sequence Similarity Network Reveals Common Ancestry of Multidomain Proteins
    PLoS Comput Biol, Vol. 4, No. 5. (16 May 2008), e1000063.
    by Nan Song, Jacob M Joseph, George B Davis, Dannie Durand
    posted to protein domain by zwang on 2008-06-27 04:08:47 as **** along with 2 people Ema tmmurali
  • Dynamics and Design Principles of a Basic Regulatory Architecture Controlling Metabolic Pathways
    PLoS Biology, Vol. 6, No. 6. (1 June 2008), e146.
    by Chen-Shan Chin, Victor Chubukov, Emmitt R Jolly, Joe Derisi, Hao Li
  • Structural specificity in coiled-coil interactions
    Current Opinion in Structural Biology, Vol. In Press, Corrected Proof
    by Gevorg Grigoryan, Amy E Keating
    posted to structure interaction coil by zwang on 2008-06-27 03:58:27 as ** along with 2 people marck phoenixzxl
  • An in Vivo Map of the Yeast Protein Interactome
    Science, Vol. 320, No. 5882. (13 June 2008), pp. 1465-1470.
    by Kirill Tarassov, Vincent Messier, Christian R Landry, Stevo Radinovic, Mercedes M Molina, Igor Shames, Yelena Malitskaya, Jackie Vogel, Howard Bussey, Stephen W Michnick
  • Coils in the membrane core are conserved and functionally important
    Journal of Molecular Biology, Vol. In Press, Accepted Manuscript
    by Anni Kauko, Kristoffer Illergård, Arne Elofsson
    posted to protein coil by zwang on 2008-06-27 03:56:58 as * along with 1 person paulschlesinger
  • A Maximum Likelihood Method for Detecting Directional Evolution in Protein Sequences and its Application to Influenza A Virus.
    Molecular biology and evolution (29 May 2008)
    by Sergei L L Kosakovsky Pond, Art F Y F Poon, Andrew J J Leigh Brown, Simon D W D Frost
  • Ensemble Non-negative Matrix Factorization Methods for Clustering Protein-Protein Interactions
    Bioinformatics (12 June 2008), btn286.
    by Derek Greene, Gerard Cagney, Nevan Krogan, Padraig Cunningham
    posted to protein interaction clustering by zwang on 2008-06-27 03:43:26 as **
  • Protein model refinement using an optimized physics-based all-atom force field
    Proceedings of the National Academy of Sciences, Vol. 105, No. 24. (17 June 2008), pp. 8268-8273.
    by Anna Jagielska, Liliana Wroblewska, Jeffrey Skolnick
  • Progress and challenges in protein structure prediction
    Current Opinion in Structural Biology, Vol. 18, No. 3. (June 2008), pp. 342-348.
    by Yang Zhang
    posted to structure protein prediction by zwang on 2008-06-27 03:37:25 as ** along with 2 people marck phoenixzxl
  • Assembly reflects evolution of protein complexes
    Nature (18 June 2008)
    by Emmanuel D Levy, Elisabetta B Erba, Carol V Robinson, Sarah A Teichmann
  • The Leucine-Rich Repeat Domain of Internalin B Folds along a Polarized N-Terminal Pathway
    Structure, Vol. 16, No. 5. (7 May 2008), pp. 705-714.
    by Naomi Courtemanche, Doug Barrick
    posted to protein domain by zwang on 2008-06-26 04:08:33 as **
  • Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis
    Science, Vol. 320, No. 5883. (20 June 2008), pp. 1632-1635.
    by Ari Loytynoja, Nick Goldman
  • Direct observation of fast protein conformational switching
    Proceedings of the National Academy of Sciences, Vol. 105, No. 25. (24 June 2008), pp. 8619-8624.
    by Haruto Ishikawa, Kyungwon Kwak, Jean K Chung, Seongheun Kim, Michael D Fayer
    posted to structure protein by zwang on 2008-06-25 05:44:14 as **
  • Inhibition of expression of virulence genes of Yersinia pestis in Escherichia coli by external guide sequences and RNase P
    RNA (20 June 2008), rna.1120508.
    by Jae-Hyeong Ko, Mina Izadjoo, Sidney Altman
    posted to rnasep expression bacterial by zwang on 2008-06-25 04:44:36 as ****
  • Chemistry & Biology -- Yoshikuni et al.
    posted to evolution by zwang on 2008-06-22 09:48:46 as **
  • Using support vector machine combined with auto covariance to predict protein-protein interactions from protein sequences
    Nucl. Acids Res. (4 April 2008), gkn159.
    by Yanzhi Guo, Lezheng Yu, Zhining Wen, Menglong Li
  • Global Considerations in Hierarchical Clustering Reveal Meaningful Patterns in Data
    PLoS ONE, Vol. 3, No. 5. (21 May 2008), e2247.
    by Roy Varshavsky, David Horn, Michal Linial
    posted to hierarchical clustering by zwang on 2008-06-16 03:50:35 as ***
  • Improvisation in evolution of genes and genomes: whose structure is it anyway?
    Current opinion in structural biology (17 May 2008)
    by Boris E E Shakhnovich, Eugene I I Shakhnovich
    posted to genome gene evolution by zwang on 2008-06-16 03:50:16 as ** along with 2 people marck cabbagesofdoom
  • Multiple protein sequence alignment
    Current Opinion in Structural Biology, Vol. In Press, Corrected Proof
    by Jimin Pei
  • Predicting novel RNA-RNA interactions.
    Current opinion in structural biology (14 May 2008)
    by Irmtraud M M Meyer
    posted to structure rna prediction interaction by zwang on 2008-06-16 03:49:12 as ***** along with 1 person marck
  • Implications from a Network-Based Topological Analysis of Ubiquitin Unfolding Simulations
    PLoS ONE, Vol. 3, No. 5. (14 May 2008), e2149.
    by Arun Krishnan, Alessandro Giuliani, Joseph P Zbilut, Masaru Tomita
  • GFP-based optimization scheme for the overexpression and purification of eukaryotic membrane proteins in Saccharomyces cerevisiae
    Nat. Protocols, Vol. 3, No. 5. (April 2008), pp. 784-798.
    by David Drew, Simon Newstead, Yo Sonoda, Hyun Kim, Gunnar von Heijne, So Iwata
    posted to yeast purification protein expression by zwang on 2008-06-16 01:50:58 as ****
  • The prokaryotic tree of life: past, present...and future?
    Trends in Ecology & Evolution, Vol. 23, No. 5. (May 2008), pp. 276-281.
    by James O Mcinerney, James A Cotton, Davide Pisani
    posted to prokaryote phylogeny evolution by zwang on 2008-06-16 01:48:25 as ** along with 1 person balicea
  • Genomic analysis of estrogen cascade reveals histone variant H2A.Z associated with breast cancer progression
    Mol Syst Biol, Vol. 4 (15 April 2008)
    by Sujun Hua, Caleb B Kallen, Ruby Dhar, Maria T Baquero, Christopher E Mason, Beth A Russell, Parantu K Shah, Jiang Liu, Andrey Khramtsov, Maria S Tretiakova, Thomas N Krausz, Olufunmilayo I Olopade, David L Rimm, Kevin P White
    posted to histone genome-wide by zwang on 2008-06-13 12:18:55 as ** along with 1 person mclarenv
  • A map of human protein interactions derived from co-expression of human mRNAs and their orthologs
    Mol Syst Biol, Vol. 4 (15 April 2008)
    by Arun K Ramani, Zhihua Li, Traver G Hart, Mark W Carlson, Daniel R Boutz, Edward M Marcotte
  • Mathematical modeling of pathogenicity of Cryptococcus neoformans
    Mol Syst Biol, Vol. 4 (15 April 2008)
    by Jacqueline Garcia, John Shea, Fernando Alvarez-Vasquez, Asfia Qureshi, Chiara Luberto, Eberhard O Voit, Maurizio Del Poeta
    posted to modeling mathematic by zwang on 2008-06-13 12:18:14 as **
  • A Bayesian Estimator of Protein-Protein Association Probabilities
    Bioinformatics (22 May 2008), btn238.
    by JM Gilmore, DL Auberry, JL Sharp, AM White, KK Anderson, DS Daly
  • Estimating dynamic models for gene regulation networks
    Bioinformatics (27 May 2008), btn246.
    by Jiguo Cao, Hongyu Zhao
    posted to regulation network modeling gene dynamics by zwang on 2008-06-03 04:00:45 as **
  • Toward a Comprehensive Temperature-Sensitive Mutant Repository of the Essential Genes of Saccharomyces cerevisiae
    Molecular Cell, Vol. 30, No. 2. (25 April 2008), pp. 248-258.
    by Shay Ben-Aroya, Candice Coombes, Teresa Kwok, Kathryn A O'Donnell, Jef D Boeke, Philip Hieter
    posted to yeast mutation gene by zwang on 2008-06-02 07:17:18 as ****
  • Evolution: A gene is born
    Nature Reviews Genetics, Vol. 9, No. 6., pp. 415-415.
    by Tanita Casci
    posted to yeast gene evolution by zwang on 2008-05-20 15:52:22 as **** along with 1 person cabbagesofdoom
  • Estimating the size of the human interactome
    Proceedings of the National Academy of Sciences (12 May 2008), 0708078105.
    by Michael P Stumpf, Thomas Thorne, Eric de Silva, Ronald Stewart, Hyeong J An, Michael Lappe, Carsten Wiuf
  • An optimized split-ubiquitin cDNA-library screening system to identify novel interactors of the human Frizzled 1 receptor
    Nucl. Acids Res., Vol. 36, No. 6. (1 April 2008), e37.
    by Dietmar Dirnberger, Monika Messerschmid, Ralf Baumeister
    posted to interaction human genome-wide by zwang on 2008-05-14 12:10:35 as **
  • Network-based global inference of human disease genes
    Mol Syst Biol, Vol. 4 (6 May 2008)
    by Xuebing Wu, Rui Jiang, Michael Q Zhang, Shao Li
  • Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis
    Mol Syst Biol, Vol. 4 (6 May 2008)
    by Naoyuki Sugiyama, Hirofumi Nakagami, Keiichi Mochida, Arsalan Daudi, Masaru Tomita, Ken Shirasu, Yasushi Ishihama
    posted to phosphorylation by zwang on 2008-05-09 02:51:54 as * along with 3 people Ema kengg neils
  • Mutual information without the influence of phylogeny or entropy dramatically improves residue contact prediction
    Bioinformatics, Vol. 24, No. 3. (1 February 2008), pp. 333-340.
    by SD Dunn, LM Wahl, GB Gloor
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